Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaselia_20abdita_20[genbank_20GCA_5F001015175.1_202015-05-29] 121,379 sequences; 412,270,594 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq24539 105 8e-18 seq42819 100 3e-16 seq102446 98.7 1e-15 seq91888 98.7 1e-15 seq72018 98.7 1e-15 seq36856 98.7 1e-15 seq21263 98.7 1e-15 seq62988 96.9 4e-15 seq56453 96.9 4e-15 seq74336 95.1 1e-14 seq35583 95.1 1e-14 seq25447 95.1 1e-14 seq3625 95.1 1e-14 seq66572 93.3 5e-14 seq35644 93.3 5e-14 seq12065 93.3 5e-14 seq890 93.3 5e-14 seq86817 91.5 2e-13 seq26001 84.2 2e-11 >seq24539 Length=7478 Score = 105 bits (116), Expect = 8e-18 Identities = 79/92 (86%), Gaps = 2/92 (2%) Strand=Plus/Minus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||||||| ||||| || | |||||| |||||| ||||||||||||||||||||| |||| Sbjct 2261 AAAAATTATCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 2202 Query 60117 TCACCACTATACTACCGAGGA--TTGAATATA 60146 | |||||||||||| |||||| |||||| || Sbjct 2201 TGACCACTATACTATCGAGGATGTTGAATTTA 2170 >seq42819 Length=15457 Score = 100 bits (110), Expect = 3e-16 Identities = 75/88 (85%), Gaps = 0/88 (0%) Strand=Plus/Minus Query 60051 TTTATGAAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGG 60110 |||| |||||| ||||| || | |||||| |||||| ||||||||||||||||||||| Sbjct 3138 TTTAATAAAAATAATCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGG 3079 Query 60111 ACATACTCACCACTATACTACCGAGGAT 60138 ||||| |||||||||||| ||||||| Sbjct 3078 GGATACTGACCACTATACTATCGAGGAT 3051 Score = 98.7 bits (108), Expect = 1e-15 Identities = 68/77 (88%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 60062 TTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACC 60121 |||||||| || | |||||| |||||| ||||||||||||||||||||| ||||| ||| Sbjct 8318 TTTTCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACC 8377 Query 60122 ACTATACTACCGAGGAT 60138 ||||||||| ||||||| Sbjct 8378 ACTATACTATCGAGGAT 8394 Score = 95.1 bits (104), Expect = 1e-14 Identities = 72/84 (86%), Gaps = 2/84 (2%) Strand=Plus/Plus Query 60062 TTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACC 60121 ||| |||| || | |||||| |||||| ||||||||||||||||||||| ||||| ||| Sbjct 9193 TTTCCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACC 9252 Query 60122 ACTATACTACCGAGGA--TTGAAT 60143 ||||||||| |||||| |||||| Sbjct 9253 ACTATACTATCGAGGATGTTGAAT 9276 >seq102446 Length=1555 Score = 98.7 bits (108), Expect = 1e-15 Identities = 71/82 (87%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||| ||| ||||| || | |||||| |||||| ||||||||||||||||||||| |||| Sbjct 771 AAAGATTATCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 712 Query 60117 TCACCACTATACTACCGAGGAT 60138 | |||||||||||| ||||||| Sbjct 711 TGACCACTATACTATCGAGGAT 690 >seq91888 Length=1758 Score = 98.7 bits (108), Expect = 1e-15 Identities = 71/82 (87%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||| ||| ||||| || | |||||| |||||| ||||||||||||||||||||| |||| Sbjct 919 AAAGATTATCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 978 Query 60117 TCACCACTATACTACCGAGGAT 60138 | |||||||||||| ||||||| Sbjct 979 TGACCACTATACTATCGAGGAT 1000 Score = 93.3 bits (102), Expect = 5e-14 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 ||||| || | |||||| |||||| ||||||||||||||||||||| ||||| |||||| Sbjct 1560 TCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACT 1619 Query 60125 ATACTACCGAGGAT 60138 |||||| ||||||| Sbjct 1620 ATACTATCGAGGAT 1633 >seq72018 Length=1766 Score = 98.7 bits (108), Expect = 1e-15 Identities = 71/82 (87%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||| ||| ||||| || | |||||| |||||| ||||||||||||||||||||| |||| Sbjct 1346 AAAGATTATCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 1405 Query 60117 TCACCACTATACTACCGAGGAT 60138 | |||||||||||| ||||||| Sbjct 1406 TGACCACTATACTATCGAGGAT 1427 >seq36856 Length=8663 Score = 98.7 bits (108), Expect = 1e-15 Identities = 71/82 (87%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||| || |||||| || | |||||| |||||| ||||||||||||||||||||| |||| Sbjct 7548 AAATATATTCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 7607 Query 60117 TCACCACTATACTACCGAGGAT 60138 | |||||||||||| ||||||| Sbjct 7608 TGACCACTATACTATCGAGGAT 7629 >seq21263 Length=22879 Score = 98.7 bits (108), Expect = 1e-15 Identities = 88/107 (82%), Gaps = 4/107 (4%) Strand=Plus/Plus Query 60034 ATAACAACAAATTAAC-GTTTATGAAAA-ATTTTCTCCTCGGCAGGGAATCGAACCCTGG 60091 |||| || ||| ||| ||| || |||| | | ||||| || | |||||| |||||| || Sbjct 2920 ATAAAAAAAAA--AACTGTTCATAAAAATAATGTCTCCCCGACGGGGAATTGAACCCCGG 2977 Query 60092 TCTCCCGCGTGACAGGCGGACATACTCACCACTATACTACCGAGGAT 60138 ||||||||||||||||||| ||||| |||||||||||| ||||||| Sbjct 2978 TCTCCCGCGTGACAGGCGGGGATACTGACCACTATACTATCGAGGAT 3024 >seq62988 Length=14884 Score = 96.9 bits (106), Expect = 4e-15 Identities = 71/83 (86%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 || || || |||| || | |||||| |||||| ||||||||||||||||||||| |||| Sbjct 9594 AAGAAATTCCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 9535 Query 60117 TCACCACTATACTACCGAGGATT 60139 | |||||||||||| |||||||| Sbjct 9534 TGACCACTATACTATCGAGGATT 9512 >seq56453 Length=1943 Score = 96.9 bits (106), Expect = 4e-15 Identities = 73/85 (86%), Gaps = 2/85 (2%) Strand=Plus/Minus Query 60061 ATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCAC 60120 |||| |||| || | |||||| |||||| ||||||||||||||||||||| ||||| || Sbjct 769 ATTTCCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGAC 710 Query 60121 CACTATACTACCGAGGA--TTGAAT 60143 |||||||||| |||||| |||||| Sbjct 709 CACTATACTATCGAGGATGTTGAAT 685 >seq74336 Length=1927 Score = 95.1 bits (104), Expect = 1e-14 Identities = 72/84 (86%), Gaps = 2/84 (2%) Strand=Plus/Minus Query 60057 AAAAATTTT--CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACAT 60114 ||||||| | |||| || | |||||| |||||| ||||||||||||||||||||| || Sbjct 710 AAAAATTATAACTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGAT 651 Query 60115 ACTCACCACTATACTACCGAGGAT 60138 ||| |||||||||||| ||||||| Sbjct 650 ACTGACCACTATACTATCGAGGAT 627 >seq35583 Length=30480 Score = 95.1 bits (104), Expect = 1e-14 Identities = 70/82 (85%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||| | || |||| || | |||||| |||||| ||||||||||||||||||||| |||| Sbjct 196 AAAGAATTCCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 137 Query 60117 TCACCACTATACTACCGAGGAT 60138 | |||||||||||| ||||||| Sbjct 136 TGACCACTATACTATCGAGGAT 115 >seq25447 Length=6539 Score = 95.1 bits (104), Expect = 1e-14 Identities = 66/75 (88%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 ||||| || | |||||| |||||| ||||||||||||||||||||| ||||| |||||| Sbjct 3240 TCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACT 3181 Query 60125 ATACTACCGAGGATT 60139 |||||| |||||||| Sbjct 3180 ATACTATCGAGGATT 3166 >seq3625 Length=9568 Score = 95.1 bits (104), Expect = 1e-14 Identities = 77/92 (84%), Gaps = 5/92 (5%) Strand=Plus/Plus Query 60057 AAAAATTTTCTCCTC---GGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACA 60113 |||||| || ||||| | | |||||| |||||| ||||||||||||||||||||| | Sbjct 6023 AAAAATATTGTCCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGA 6082 Query 60114 TACTCACCACTATACTACCGAGGA--TTGAAT 60143 |||| |||||||||||| |||||| |||||| Sbjct 6083 TACTGACCACTATACTATCGAGGATGTTGAAT 6114 >seq66572 Length=1444 Score = 93.3 bits (102), Expect = 5e-14 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 ||||| || | |||||| |||||| ||||||||||||||||||||| ||||| |||||| Sbjct 1084 TCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACT 1143 Query 60125 ATACTACCGAGGAT 60138 |||||| ||||||| Sbjct 1144 ATACTATCGAGGAT 1157 >seq35644 Length=4270 Score = 93.3 bits (102), Expect = 5e-14 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 ||||| || | |||||| |||||| ||||||||||||||||||||| ||||| |||||| Sbjct 3928 TCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACT 3869 Query 60125 ATACTACCGAGGAT 60138 |||||| ||||||| Sbjct 3868 ATACTATCGAGGAT 3855 >seq12065 Length=3532 Score = 93.3 bits (102), Expect = 5e-14 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 ||||| || | |||||| |||||| ||||||||||||||||||||| ||||| |||||| Sbjct 1275 TCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACT 1216 Query 60125 ATACTACCGAGGAT 60138 |||||| ||||||| Sbjct 1215 ATACTATCGAGGAT 1202 >seq890 Length=12668 Score = 93.3 bits (102), Expect = 5e-14 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 ||||| || | |||||| |||||| ||||||||||||||||||||| ||||| |||||| Sbjct 4953 TCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACT 5012 Query 60125 ATACTACCGAGGAT 60138 |||||| ||||||| Sbjct 5013 ATACTATCGAGGAT 5026 >seq86817 Length=2164 Score = 91.5 bits (100), Expect = 2e-13 Identities = 71/84 (85%), Gaps = 2/84 (2%) Strand=Plus/Plus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | |||||| |||||| ||||||||||||||||||||| ||||| ||||| | Sbjct 271 CTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACCA 330 Query 60126 TACTACCGAGGA--TTGAATATAT 60147 ||||| |||||| ||||||| || Sbjct 331 TACTATCGAGGATGTTGAATAAAT 354 >seq26001 Length=10617 Score = 84.2 bits (92), Expect = 2e-11 Identities = 151/218 (69%), Gaps = 2/218 (1%) Strand=Plus/Minus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||| | ||| ||||| | || ||| ||||| ||||||||||| | ||||| || | Sbjct 8777 ACGAAGCACTAAATGAAGAGTAGACTCTTTTTGGATATTGTAATCGGAAAGAGTACGGCC 8718 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 ||| || || ||||| |||||||| || | || ||||| || | || | | ||| || Sbjct 8717 GTCTTCAAGTTGCTTGCCAGCGAAGATCAATCTTTGCTGATCTGGAGGAATTCCCTCTTT 8658 Query 43088 GTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGA 43146 || | ||| | || | ||| | || | | || || | ||| || || | || | Sbjct 8657 GT-CTTGAATCTTGGCTTTAACATTCTCGATAGTATCCGAAGGTTCTACTTCTAGGGTAA 8599 Query 43147 TGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 43184 ||||||| ||||| || || ||||| || ||||||||| Sbjct 8598 TGGTTTTACCCGTGAGGGTTTTTACGAAAATTTGCATT 8561 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570950016894120