Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaselia_20abdita_20[genbank_20GCA_5F001015175.1_202015-05-29] 121,379 sequences; 412,270,594 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq30215 123 2e-23 seq63354 98.7 8e-16 >seq30215 Length=1837 Score = 123 bits (136), Expect = 2e-23 Identities = 155/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 ||||| || || ||| |||||| ||||| ||||| || || | ||| |||| ||| Sbjct 1729 ACCAAATGAAGAGTGGACTCCTTTTGAATATTGTAATCTGACAATGTACGACCGTCTTCC 1670 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 | ||| ||||| ||||| ||||| ||||||||||| ||||| | ||| || ||||| | Sbjct 1669 AATTGCTTTCCAGCGAAGATCAAACGCTGTTGGTCTGGAGGAATACCTTCTTTGTCTTGA 1610 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 ||||| ||| || | | | | | || | ||| ||||||| |||||| ||||| Sbjct 1609 ATTTTAGCCTTGACATTCTCGATGGTATCGGAAGGCTCAACCTCCAAGGTAATTGTCTTA 1550 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATGTTG 45340 || |||| |||||| || || || |||||| || Sbjct 1549 CCAGTCAAAGTCTTGACGAAAATCTGCATGATG 1517 >seq63354 Length=4016 Score = 98.7 bits (108), Expect = 8e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 45125 AATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCG 45184 || |||||||| || ||| |||||| || |||||||||||| || ||| |||| Sbjct 1985 AACACCAAGTGAAGGGTGGACTCCTTTTGGATGTTGTAGTCGGACAAGGTGCGTCCGTCT 1926 Query 45185 TCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244 |||| ||| ||||| ||||| ||||| || ||||| || || || | ||||| ||||| Sbjct 1925 TCCAATTGCTTTCCAGCGAAGATCAAACGTTGTTGATCTGGTGGGATTCCCTCTTTGTCT 1866 Query 45245 GCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTC 45304 || || ||| || | | | |||| | || || |||| |||||| ||| Sbjct 1865 TGGATCTTGGCCTTGACATTTTCAATGGTGTCGGAAGGTTCGACTTCCAAGGTAATGGTC 1806 Query 45305 TTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || || || || ||||| || ||||| ||||| Sbjct 1805 TTACCAGTAAGGGTCTTGACGAAGATCTGCAT 1774 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 394490762663959