Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaselia_20abdita_20[genbank_20GCA_5F001015175.1_202015-05-29] 121,379 sequences; 412,270,594 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq82395 113 4e-20 >seq82395 Length=2084 Score = 113 bits (124), Expect = 4e-20 Identities = 386/589 (66%), Gaps = 12/589 (2%) Strand=Plus/Plus Query 20928 GGATCAACGTGGTTGTTGTAAACGTGGGCGTCACCCAAGGTGTGCACAAAGTCTCCCGGG 20987 || || || || || ||||||||||| | ||| || || | ||| |||||||| ||| Sbjct 614 GGTTCCACATGATTCTTGTAAACGTGAGTGTCTCCGAAAGAGTGAACAAAGTCGCCCACC 673 Query 20988 GTCAGGCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAAC 21047 | || || || || || |||| || |||| | || || ||||| || || ||| Sbjct 674 TTTAGTCCGCAAACATGGGCAATCATGTAGGTCAACAATGCATAACTGGCAATATTGAAC 733 Query 21048 GGGACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCCCCGA 21107 || || || || || | ||||| || |||||||||| | || || || || ||| Sbjct 734 GGAACTCCAAGCCCAACATCGGCAGATCTCTGGTACATCAAACATGAGAGTTCGTCCCCT 793 Query 21108 GCCACGTAAAACTGACACAAAACGTGACAAGGAGGGAGAGCCATCCGCGCGAGGTCCGCG 21167 ||||| |||||| ||| ||||||||||| | |||||| | ||||||| || Sbjct 794 TGAACGTAGAACTGAGCGAAACAATGACAAGGAGGCAAAGCCATTTTGGGGAGGTCCACG 853 Query 21168 GGGTTCCACGCGCACATAACGATGCG-CCGATCGTGGGGCCGCCTGTTAATTAGATCCAC 21226 || ||||| || ||||| || || | | ||| ||| | || ||| | | Sbjct 854 GGATTCCAGGCAGACATACAAATCCGTCTGTCCGTAGGG-TTATTCTTGATTCTCTGAAT 912 Query 21227 CACGTAACGCAGCTGGTCCACCCCCTGACCCTCGTAGTTGGCGTCG-GCC--CCCCTGTA 21283 |||| | ||| ||||| || || | | ||| | | | ||| | | | || Sbjct 913 GACGTCATTCAGTTGGTCTACGCCTT--TGTTGGTA-TAGTCATCGTGACAGGTTTTATA 969 Query 21284 CTCCGCCCCAAAATGTCTCCACTGGAACCCGTACACCGGCCCCAGATCGCCCTCGCGGCG 21343 ||| || || ||||| | ||| ||||| ||||| ||||| ||||| || ||||| | Sbjct 970 CTCTGCTCCGAAATGACGCCATTGGAATCCGTAGACCGGTCCCAGGTCACCCTCTTCTCT 1029 Query 21344 GTCCCCGAAGCCCTGCGCCGCCAAAAAGGCGC-GGGACCCGTGCGCGTCCCAAATTTTTA 21402 ||| ||| || | ||||||| | | || || ||| ||||||||||| | | Sbjct 1030 GTCGGTGAATCCACACTTGTCCAAAAACTCTCTGGTACTATTGC-CGTCCCAAATTCTCA 1088 Query 21403 C-GCCGCGGCGCGACAGTTCGGTGGAGTCGGTGGAGCCCCTGATAAACCACAGCAACTCC 21461 | | | | || || ||| | ||| || | |||||||||| | |||| Sbjct 1089 CATTCTTCTCTTGCAAGATC-TTGGCATTGGTCTGACCTTTTATAAACCACAAAAGCTCC 1147 Query 21462 TCCACGACGCCCCTCCAAAACACCCTTTTGGTGGTTAACAGAGGAAACT 21510 ||| |||| || ||||| || || ||||| ||||| |||| |||||||| Sbjct 1148 TCCGCGACTCCTCTCCAGAAAACTCTTTTCGTGGTCAACAAAGGAAACT 1196 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427143188155920