Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaselia_20abdita_20[genbank_20GCA_5F001015175.1_202015-05-29] 121,379 sequences; 412,270,594 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq116385 134 1e-26 >seq116385 Length=1425 Score = 134 bits (148), Expect = 1e-26 Identities = 345/520 (66%), Gaps = 4/520 (1%) Strand=Plus/Minus Query 13663 GCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCT 13722 ||||| ||||| || || || || || ||| |||||||| || || || || || || Sbjct 583 GCAAAGTCACAGTGGAGTCCTTCGTCCCTAGAGATAAGTTCATTGGAGAAGGTCAAACCA 524 Query 13723 GGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATT 13782 |||||||| || | || || ||||| || || || ||||| |||| ||||| || Sbjct 523 GGCATCAAACCCCTCTTCTTCAACCAGAAGATCGCGGCGAAACTTCCGCTGAAGAAAATG 464 Query 13783 CCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTTTTTTGTTTGATATC 13842 || ||||| |||||||| || || | || || |||| | || ||| | ||| Sbjct 463 CCTTCAACGGCAGCAAAAGCAATGATTCTCTCGGCAAAGGTGGCGGATTTACTGCCAATC 404 Query 13843 CATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCGATTGCATTGAAT 13902 || ||||| |||| || || || | | || | | |||| || ||||| Sbjct 403 CAAGACAATGCCCAGTCAGCCTTCTTCTTCACACAAGGTAGATTCTCGACAGCGTTGAAG 344 Query 13903 AA-ATGTTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTC 13961 | | || ||| || | | | | | |||| | || || | | || |||||||| Sbjct 343 AGGAAGTCTCTTTCCTGTGGATCGCGGA-TGTAAGAGTCGATTAAAATACTGTACATTTC 285 Query 13962 AGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTG 14021 ||||| | ||| || ||||| ||||| || ||||| ||||| | |||||| | || Sbjct 284 CGAGTGGACGTTCTCCATAGCAATCTGGAACCCATAGAAACAGCGAGCTTCAGTAATCTG 225 Query 14022 TACCTCC-GAGTAAAATCTTTCTGCCAAGTTTTCATTAACAATACCATCACTAGCTGCAA 14080 || ||| | || ||| | ||| ||||||||||||| ||||| ||||| ||| || | Sbjct 224 GACTTCCTGGGTGAAA-CGTTCCACCAAGTTTTCATTGACAATGCCATCGGAAGCGGCGA 166 Query 14081 AAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGTTGAGTTTTTTCCAATCGG 14140 | || ||||| | || ||| |||| | |||| | || | || | ||| |||| Sbjct 165 AGAAAGCCAAAACGTGGGAAATGAAGTGCTTCTCTCCGGAATTCAACTTCTCCCAGTCGG 106 Query 14141 CTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAA 14180 || ||||| || ||||| || || || || ||||| || Sbjct 105 CTTGGTCCTTGGATAGATCGACCTCCTCCACAGTCCAGAA 66 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 477862667125560