Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaselia_20abdita_20[genbank_20GCA_5F001015175.1_202015-05-29] 121,379 sequences; 412,270,594 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq26001 152 4e-32 seq30215 141 7e-29 seq63354 134 1e-26 >seq26001 Length=10617 Score = 152 bits (168), Expect = 4e-32 Identities = 159/209 (76%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 15155 ACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCT 15214 ||||||||||| || || |||||||| || ||||||||| ||| | | ||||||| Sbjct 8770 ACTAAATGAAGAGTAGACTCTTTTTGGATATTGTAATCGGAAAGAGTACGGCCGTCTTCA 8711 Query 15215 AATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAA 15274 | ||| ||||||||| | ||||| | ||| || || |||||||| |||||||| | Sbjct 8710 AGTTGCTTGCCAGCGAAGATCAATCTTTGCTGATCTGGAGGAATTCCCTCTTTGTCTTGA 8651 Query 15275 ATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTA 15334 || ||| || ||| | || || ||||| | |||||| |||| ||||||||||||| Sbjct 8650 ATCTTGGCTTTAACATTCTCGATAGTATCCGAAGGTTCTACTTCTAGGGTAATGGTTTTA 8591 Query 15335 CCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 || || || |||||||| ||||||||||| Sbjct 8590 CCCGTGAGGGTTTTTACGAAAATTTGCAT 8562 >seq30215 Length=1837 Score = 141 bits (156), Expect = 7e-29 Identities = 159/211 (75%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 15155 ACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCG--CGTCTT 15212 || |||||||| ||||| || ||||| || |||||||| | | ||| || |||||| Sbjct 1729 ACCAAATGAAGAGTGGACTCCTTTTGAATATTGTAATC--TGACAATGTACGACCGTCTT 1672 Query 15213 CTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCAC 15272 | ||||| || |||||| | |||||||| |||||||| ||||| ||||||||||| Sbjct 1671 CCAATTGCTTTCCAGCGAAGATCAAACGCTGTTGGTCTGGAGGAATACCTTCTTTGTCTT 1612 Query 15273 AAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTT 15332 |||||| ||| ||| | || ||||||||| | || || || |||||||| || | Sbjct 1611 GAATTTTAGCCTTGACATTCTCGATGGTATCGGAAGGCTCAACCTCCAAGGTAATTGTCT 1552 Query 15333 TACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 |||| |||| ||| || || ||||| ||||| Sbjct 1551 TACCAGTCAAAGTCTTGACGAAAATCTGCAT 1521 >seq63354 Length=4016 Score = 134 bits (148), Expect = 1e-26 Identities = 157/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 15152 AAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCT 15211 || || || ||||||||||| || ||||| |||||||| ||| | | | ||||| Sbjct 1985 AACACCAAGTGAAGGGTGGACTCCTTTTGGATGTTGTAGTCGGACAAGGTGCGTCCGTCT 1926 Query 15212 TCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCA 15271 || ||||| || |||||| | |||||||||||||| || ||| ||||| |||||||| Sbjct 1925 TCCAATTGCTTTCCAGCGAAGATCAAACGTTGTTGATCTGGTGGGATTCCCTCTTTGTCT 1866 Query 15272 CAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTT 15331 || ||| ||| ||| |||| ||||| ||| | ||| || || ||||||||||| Sbjct 1865 TGGATCTTGGCCTTGACATTTTCAATGGTGTCGGAAGGTTCGACTTCCAAGGTAATGGTC 1806 Query 15332 TTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 ||||| || || || || || || || ||||| Sbjct 1805 TTACCAGTAAGGGTCTTGACGAAGATCTGCAT 1774 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361643425932639