Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaselia_20abdita_20[genbank_20GCA_5F001015175.1_202015-05-29] 121,379 sequences; 412,270,594 total letters Query= NC_004778.3 Length=129593 Score E Sequences producing significant alignments: (Bits) Value seq26001 96.9 3e-15 >seq26001 Length=10617 Score = 96.9 bits (106), Expect = 3e-15 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 18845 GTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCCTCCAGCTGTTTACCC 18904 |||||||| ||||| ||||||||||| | | || | |||| || || || || || Sbjct 8758 GTAGACTCTTTTTGGATATTGTAATCGGAAAGAGTACGGCCGTCTTCAAGTTGCTTGCCA 8699 Query 18905 GCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGCAATTTTCTGTTTT 18964 || | || | ||| |||||||| || | ||||||||||| ||| || ||| Sbjct 8698 GCGAAGATCAATCTTTGCTGATCTGGAGGAATTCCCTCTTTGTCTTGAATCTTGGCTTTA 8639 Query 18965 ACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGTTTTACCTGTTAAAGTT 19024 || | ||| |||||| ||| || ||| | ||||||||||||||| || | ||| Sbjct 8638 ACATTCTCGATAGTATCCGAAGGTTCTACTTCTAGGGTAATGGTTTTACCCGTGAGGGTT 8579 Query 19025 TTGACAAAAATTTGCATT 19042 || || |||||||||||| Sbjct 8578 TTTACGAAAATTTGCATT 8561 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 413959519736326