Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaselia_20abdita_20[genbank_20GCA_5F001015175.1_202015-05-29] 121,379 sequences; 412,270,594 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq82395 113 3e-20 >seq82395 Length=2084 Score = 113 bits (124), Expect = 3e-20 Identities = 450/702 (64%), Gaps = 15/702 (2%) Strand=Plus/Plus Query 25276 ATCAGACTGCCATCCTCATCCTTATGGCGGGATGAGGGTCGTAACCCTCCAGGGAGAAAT 25335 |||| || ||||| ||| | |||| || | || || || || || | | ||||| Sbjct 462 ATCAAACAGCCATTTCCATTTTAATGGTTGGGTATGGATCATATCCTTCGATAGTGAAAT 521 Query 25336 CCTCTGCCTTAAAGTCGTCCAGGCTCTCCACCCTCCTGTTTATCCTCAGTGTGGGAAAGG 25395 | || || ||||| || | | || || | | |||||| |||| | || || | Sbjct 522 CTTCGAATTTGAAGTCCTCGATTTTTTCAACTTTACGGTTTATGACCAGTTTAGGGAATG 581 Query 25396 GTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCTACGTGATCCAGGTAGACGTGAG 25455 |||| || | |||| ||||| |||| ||||| || |||| | ||| ||||||| Sbjct 582 GTCTTGGAACTCTCTTCAGCTGTTCTTTCAAAGGTTCCACATGATTCTTGTAAACGTGAG 641 Query 25456 CGTCTCCCAGAGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTAACGTAAGCCATCATGT 25515 |||||| | || ||| ||||| || ||| | ||| ||| ||| | || ||||||| Sbjct 642 TGTCTCCGAAAGAGTGAACAAAGTCGCCCACCTTTAGTCCGCAAACATGGGCAATCATGT 701 Query 25516 ACGTGAGGAGAAAG--TAGCTGGCGATGTTAAAGGGTACCCCGAACCCCATGTCCCCCCG 25573 | || | | || | || ||||| || || || || || || | ||| | || | | Sbjct 702 AGGTCA--ACAATGCATAACTGGCAATATTGAACGGAACTCCAAGCCCAACATCGGCA-G 758 Query 25574 ACCTCTGGTAGAGCTGACACGAGAGCTCTTCGTCGCTCACGTAAAACTGACACATGGTGT 25633 | |||||||| | | ||| ||||| || || | ||||| |||||| | | Sbjct 759 ATCTCTGGTACATCAAACATGAGAGTTCGTCCCCTTGAACGTAGAACTGAGCGAAACAAT 818 Query 25634 AGCACGGAGGAAGAGCTATAAGGCCCAAGTCTTTAGGGTTCCAGGCGCACACGATGATGC 25693 || ||||| | ||| || | | ||| || |||||||| ||| || | Sbjct 819 GACAAGGAGGCAAAGCCATTTTGGGGAGGTCCACGGGATTCCAGGCAGACATACAAATCC 878 Query 25694 ACCTGTCTTCTGGGTTGTCCCTGATAAGATCCGCGGTGTTTTGCAGCTGATCCACCCCCA 25753 ||||| ||||| | | |||| | | || | ||| || || || || Sbjct 879 GTCTGTCCGTAGGGTTATTCTTGATTCTCTGAATGACGTCATTCAGTTGGTCTACGCCTT 938 Query 25754 TCCCCGAGTAGTCTGCCCTCATGTCCG----TGTACTCTGCTCCGAAATACCTCCACTGG 25809 | | ||||| || || | | | |||||||||||||||| | ||| ||| Sbjct 939 TGTTGGTATAGTCA----TCGTGACAGGTTTTATACTCTGCTCCGAAATGACGCCATTGG 994 Query 25810 AACCCGTACACCGGTCCTAGGTCTCCATCTTCCCTGTGCTCAAAGCCCCTCTTATCCAAA 25869 || ||||| |||||||| ||||| || ||||| |||| || || | ||| |||||| Sbjct 995 AATCCGTAGACCGGTCCCAGGTCACCCTCTTCTCTGTCGGTGAATCCACACTTGTCCAAA 1054 Query 25870 AAGTCTCTGGAACCATTGGCGTCCCAGATCTTTACCCCCTTCTC-GGAGAGCTCTTTGGA 25928 || ||||||| || |||| ||||||| || | || |||||| | || || |||| Sbjct 1055 AACTCTCTGGTACTATTGCCGTCCCAAATTCTCACATTCTTCTCTTGCAAGATC-TTGGC 1113 Query 25929 GTTTGTGGACCCTCTGACGAACCACAGCAGCTCCGCCGTGAC 25970 || || ||| | | ||||||| |||||| ||| ||| Sbjct 1114 ATTGGTCTGACCTTTTATAAACCACAAAAGCTCCTCCGCGAC 1155 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 339634432216167