Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaselia_20abdita_20[genbank_20GCA_5F001015175.1_202015-05-29] 121,379 sequences; 412,270,594 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq77590 129 3e-25 seq45996 123 1e-23 seq69518 122 5e-23 seq64146 120 2e-22 seq59272 120 2e-22 seq24539 118 6e-22 seq115411 116 2e-21 seq36856 116 2e-21 seq68611 114 7e-21 seq17783 114 7e-21 seq100271 113 2e-20 seq60384 113 2e-20 >seq77590 Length=6007 Score = 129 bits (142), Expect = 3e-25 Identities = 87/97 (90%), Gaps = 1/97 (1%) Strand=Plus/Minus Query 11434 TAGAATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTA 11493 || ||| | |||||||||| ||||||||||| |||||||||| |||||||||||||| Sbjct 2295 TAAAATCAGTAAAAAATCAG-TTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTA 2237 Query 11494 TTAGCACGACGCTCTRACCAACTGAGCTAATGGGCCG 11530 ||||||||||||||| ||||||||||||||||||||| Sbjct 2236 TTAGCACGACGCTCTAACCAACTGAGCTAATGGGCCG 2200 Score = 122 bits (134), Expect = 5e-23 Identities = 78/86 (91%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 11444 AAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503 ||||||| | ||||||||||| |||||||||| |||||||||||||||||||||||| Sbjct 1788 AAAAAATTTAGTTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGAC 1729 Query 11504 GCTCTRACCAACTGAGCTAATGGGCC 11529 ||||| |||||||||||||||||||| Sbjct 1728 GCTCTAACCAACTGAGCTAATGGGCC 1703 Score = 118 bits (130), Expect = 6e-22 Identities = 81/91 (89%), Gaps = 1/91 (1%) Strand=Plus/Minus Query 11439 TTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGC 11498 ||| |||||| | | ||||||||||| |||||||||| ||||||||||||||||||| Sbjct 2619 TTAGTAAAAAGTTAG-TTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGC 2561 Query 11499 ACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||||| |||||||||||||||||||| Sbjct 2560 ACGACGCTCTAACCAACTGAGCTAATGGGCC 2530 >seq45996 Length=4877 Score = 123 bits (136), Expect = 1e-23 Identities = 79/87 (91%), Gaps = 0/87 (0%) Strand=Plus/Minus Query 11444 AAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503 ||||| | || ||||||||||| |||||||||| |||||||||||||||||||||||| Sbjct 3702 AAAAAGTAAAGTTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGAC 3643 Query 11504 GCTCTRACCAACTGAGCTAATGGGCCG 11530 ||||| ||||||||||||||||||||| Sbjct 3642 GCTCTAACCAACTGAGCTAATGGGCCG 3616 Score = 122 bits (134), Expect = 5e-23 Identities = 78/86 (91%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 11444 AAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503 ||||| | || ||||||||||| |||||||||| |||||||||||||||||||||||| Sbjct 3259 AAAAAGTAAAGTTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGAC 3200 Query 11504 GCTCTRACCAACTGAGCTAATGGGCC 11529 ||||| |||||||||||||||||||| Sbjct 3199 GCTCTAACCAACTGAGCTAATGGGCC 3174 Score = 122 bits (134), Expect = 5e-23 Identities = 78/86 (91%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 11444 AAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503 ||||| | || ||||||||||| |||||||||| |||||||||||||||||||||||| Sbjct 4328 AAAAAGTAAAGTTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGAC 4269 Query 11504 GCTCTRACCAACTGAGCTAATGGGCC 11529 ||||| |||||||||||||||||||| Sbjct 4268 GCTCTAACCAACTGAGCTAATGGGCC 4243 Score = 118 bits (130), Expect = 6e-22 Identities = 78/86 (91%), Gaps = 1/86 (1%) Strand=Plus/Minus Query 11445 AAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACG 11504 ||||| || ||||||||||| |||||||||| ||||||||||||||||||||||||| Sbjct 4693 AAAAAACAG-TTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACG 4635 Query 11505 CTCTRACCAACTGAGCTAATGGGCCG 11530 |||| ||||||||||||||||||||| Sbjct 4634 CTCTAACCAACTGAGCTAATGGGCCG 4609 >seq69518 Length=2638 Score = 122 bits (134), Expect = 5e-23 Identities = 80/89 (90%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500 ||| |||||| | ||||||||||| |||||||||| ||||||||||||||||||||| Sbjct 341 AATCAAAAATGTACTTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCAC 400 Query 11501 GACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||| |||||||||||||||||||| Sbjct 401 GACGCTCTAACCAACTGAGCTAATGGGCC 429 >seq64146 Length=3061 Score = 120 bits (132), Expect = 2e-22 Identities = 77/85 (91%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 11445 AAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACG 11504 |||||| | ||||||||||| |||||||||| ||||||||||||||||||||||||| Sbjct 2159 AAAAATTTACTTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACG 2218 Query 11505 CTCTRACCAACTGAGCTAATGGGCC 11529 |||| |||||||||||||||||||| Sbjct 2219 CTCTAACCAACTGAGCTAATGGGCC 2243 >seq59272 Length=1614 Score = 120 bits (132), Expect = 2e-22 Identities = 82/93 (88%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 11437 AATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTA 11496 ||| | |||||| ||||||||||||| |||||||||| ||||||||||||||||| Sbjct 937 AATAACTAAAAAGAATAATTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTA 996 Query 11497 GCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||||||| |||||||||||||||||||| Sbjct 997 GCACGACGCTCTAACCAACTGAGCTAATGGGCC 1029 >seq24539 Length=7478 Score = 118 bits (130), Expect = 6e-22 Identities = 79/89 (89%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500 || ||||| | | ||||||||||| |||||||||| ||||||||||||||||||||| Sbjct 2291 AAAAAAAAGTATAGTTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCAC 2350 Query 11501 GACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||| |||||||||||||||||||| Sbjct 2351 GACGCTCTAACCAACTGAGCTAATGGGCC 2379 >seq115411 Length=3891 Score = 116 bits (128), Expect = 2e-21 Identities = 81/93 (87%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 11438 ATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAG 11497 || || |||||| | |||||||||| |||||||||| |||||||||||||||||| Sbjct 971 ATCAAAAAAAAACTGTAGTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAG 1030 Query 11498 CACGACGCTCTRACCAACTGAGCTAATGGGCCG 11530 ||||||||||| ||||||||||||||||||||| Sbjct 1031 CACGACGCTCTAACCAACTGAGCTAATGGGCCG 1063 >seq36856 Length=8663 Score = 116 bits (128), Expect = 2e-21 Identities = 71/76 (93%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 11455 TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAA 11514 ||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||| Sbjct 7497 TTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAA 7438 Query 11515 CTGAGCTAATGGGCCG 11530 |||||||||||||||| Sbjct 7437 CTGAGCTAATGGGCCG 7422 >seq68611 Length=2265 Score = 114 bits (126), Expect = 7e-21 Identities = 85/99 (86%), Gaps = 1/99 (1%) Strand=Plus/Plus Query 11432 TATAGAATTAATAAAAAATCAAAT-TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCG 11490 || |||| | |||||| | || |||||||||| |||||||||| ||||||||||| Sbjct 659 TAAAGAAAAACTAAAAAGTTAATCGTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCG 718 Query 11491 TTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||||||||||||| |||||||||||||||||||| Sbjct 719 TTATTAGCACGACGCTCTAACCAACTGAGCTAATGGGCC 757 >seq17783 Length=8270 Score = 114 bits (126), Expect = 7e-21 Identities = 76/85 (89%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 11445 AAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACG 11504 |||||| | |||||||||| |||||||||| ||||||||||||||||||||||||| Sbjct 2971 AAAAATATATGTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACG 2912 Query 11505 CTCTRACCAACTGAGCTAATGGGCC 11529 |||| |||||||||||||||||||| Sbjct 2911 CTCTAACCAACTGAGCTAATGGGCC 2887 >seq100271 Length=1156 Score = 113 bits (124), Expect = 2e-20 Identities = 69/74 (93%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 |||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 146 TGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 205 Query 11516 TGAGCTAATGGGCC 11529 |||||||||||||| Sbjct 206 TGAGCTAATGGGCC 219 >seq60384 Length=3809 Score = 113 bits (124), Expect = 2e-20 Identities = 73/80 (91%), Gaps = 1/80 (1%) Strand=Plus/Minus Query 11452 AAAT-TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRA 11510 |||| |||||||||| |||||||||| ||||||||| ||||||||||||||||||| | Sbjct 282 AAATGTGGCCCATGAGGGGATCGAACCCGCGACCTTCGNGTTATTAGCACGACGCTCTAA 223 Query 11511 CCAACTGAGCTAATGGGCCG 11530 |||||||||||||||||||| Sbjct 222 CCAACTGAGCTAATGGGCCG 203 Lambda K H 0.638 0.410 0.920 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 261104374351804