Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaselia_20abdita_20[genbank_20GCA_5F001015175.1_202015-05-29] 121,379 sequences; 412,270,594 total letters Query= NC_006883.2 Length=252401 Score E Sequences producing significant alignments: (Bits) Value seq24307 109 9e-19 >seq24307 Length=12971 Score = 109 bits (120), Expect = 9e-19 Identities = 162/225 (72%), Gaps = 6/225 (3%) Strand=Plus/Plus Query 193946 TGGTATTCTCTTCAATCACGAATCTCCAAGAAGAGGTGAGACATTTGTAACTCGTAAGAT 194005 ||| || || ||||| ||||||||||| |||||||| || | ||||| || | || || Sbjct 4298 TGGAATCCTTTTCAACCACGAATCTCCTAGAAGAGGAGAAAACTTTGTTACAAGGAAAAT 4357 Query 194006 TACACAAGGTTTAT--CTAAGATCTCTGTTGGATTACAGAAGATTCTTT-ATCTTGGTAA 194062 |||||||| | | |||| || ||| | ||| | | || | ||| | || || || Sbjct 4358 --CACAAGGTCTGTGGCTAAAATATCTTTAGGACAATTGGAG-TGCTTCGAACTGGGCAA 4414 Query 194063 TCTTAATGCTAAGAGGGATTGGGGACACGCAAAGGATTATGTTGAAGCGATGTGGTTAAT 194122 ||| | | || || |||||||||||||| || || || ||||| || |||||| | || Sbjct 4415 TCTCGACTCCAAAAGAGATTGGGGACACGCCAAAGACTACGTTGAGGCTATGTGGATGAT 4474 Query 194123 GTTGCAACAGGATGAACCCGATGATTATGTGATTGCTACAGGTGA 194167 | ||||| ||| ||||| ||||| ||| || ||||| || || Sbjct 4475 GCTGCAATGTGATAAACCCAGTGATTTTGTTATAGCTACTGGAGA 4519 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 806329946967240