Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaselia_20abdita_20[genbank_20GCA_5F001015175.1_202015-05-29] 121,379 sequences; 412,270,594 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq116385 95.1 1e-14 >seq116385 Length=1425 Score = 95.1 bits (104), Expect = 1e-14 Identities = 106/142 (75%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 21479 GCAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGTTAAACCG 21538 ||||| ||||| || | ||||| |||||| || | |||||| || || || ||||| Sbjct 583 GCAAAGTCACAGTGGAGTCCTTCGTCCCTAGAGATAAGTTCATTGGAGAAGGTCAAACCA 524 Query 21539 GGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCTCCTGAAAAGAAAATG 21598 ||||| || || ||||| || ||||| || || | || || ||| ||||||||| Sbjct 523 GGCATCAAACCCCTCTTCTTCAACCAGAAGATCGCGGCGAAACTTCCGCTGAAGAAAATG 464 Query 21599 CCCTCAACGGCAGCAAATGCAA 21620 || |||||||||||||| |||| Sbjct 463 CCTTCAACGGCAGCAAAAGCAA 442 Score = 82.4 bits (90), Expect = 8e-11 Identities = 209/317 (66%), Gaps = 12/317 (4%) Strand=Plus/Minus Query 21308 CTATCTGCTACAAATTCTATATATTGACACATTAATTCACAATTCATACCGATCAATTTT 21367 ||||| || |||||||| || || || |||| | ||||| ||||| ||||| | || Sbjct 921 CTATCAGCCACAAATTCAATGTACTGGGACATGAGGTCACAGTTCATGCCGATGAGGTTG 862 Query 21368 ACAGGAAGAGCTTTTGTCAAAAAAGATTTTTCTATAGAGACGGCTTCAACAATTATATTT 21427 || || || ||||| ||||| || || ||| || || || || | || || | Sbjct 861 ACGGGCAGGGCTTTAGTCAAGAATTCTTGTTCAATTTTAACAGCATCGAGGATGATTTCG 802 Query 21428 ---ATTAT---CCTAGATGTACTAGGGGGATACAATAATTGTTTAAACATCAAACATGCA 21481 ||| | | | |||| || || | || || | |||||| ||| Sbjct 801 CGGATTCTGTCCTTGGATGGCCTTTGG------ACCAAGTGATGGTACATCATGACGGCA 748 Query 21482 AAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGTTAAACCGGGC 21541 || ||||| || | ||||| |||||| || | |||||| || || || ||||| ||| Sbjct 747 AAGTCACAGTGGAGTCCTTCGTCCCTAGAGATAAGTTCATTGGAGAAGGTCAAACCAGGC 688 Query 21542 ATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCTCCTGAAAAGAAAATGCCC 21601 || || || ||||| || ||||| || || | || || ||| ||||||||||| Sbjct 687 ATCAAACCCCTCTTCTTCAACCAGAAGATCGCGGCGAAACTTCCGCTGAAGAAAATGCCT 628 Query 21602 TCAACGGCAGCAAATGC 21618 ||||| || ||||| || Sbjct 627 TCAACAGCGGCAAAAGC 611 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531093780159960