Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaselia_20abdita_20[genbank_20GCA_5F001015175.1_202015-05-29] 121,379 sequences; 412,270,594 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq93051 147 6e-30 >seq93051 Length=3786 Score = 147 bits (162), Expect = 6e-30 Identities = 337/506 (67%), Gaps = 6/506 (1%) Strand=Plus/Plus Query 363772 GTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAG 363831 || || |||||| | ||||| | || ||| | || || || ||||||||| || Sbjct 1705 GTACCTATGCTTAGAGTGTTCAATAACGTTGCAAAATATGTGGATCAGGGTGGAAATAAA 1764 Query 363832 CGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTT 363891 | || || |||||||| ||| | ||||| ||| | ||||||||||| ||| | Sbjct 1765 AGACCCGGAGCTTTTGCTATTTATTTAGAGCCATGGCATTCTGATATTTTTGAATTTTTA 1824 Query 363892 GAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTT 363951 || | |||||| || || ||||| || | || ||| | ||||| || ||||| | Sbjct 1825 GACTTGAAGAAAAATACAGGTAAAGATGAGCTCCGAGCAAGAGATCTATTTTATGCTTTA 1884 Query 363952 TGGGTTTCTGACCATTTTATGAAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTTTGC 364011 ||| || | || || ||||| ||||| || || | | || |||||||| | | || Sbjct 1885 TGGATTCCCGATTTATTCATGAAACGCGTAGAAGCTGATGAGGATTGGTCATTGATGTGT 1944 Query 364012 CCACACGAATGTCCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAA 364071 || || |||||||||| || ||||| ||||| || || | || ||| |||| | Sbjct 1945 CCCCATAAATGTCCAGGGCTACATGATGTTTGGGGAGAGGAGTTTGAGAATCTCTACGTA 2004 Query 364072 AAGTATGAATCGGAGGGAAAGGCT---CGTAAGACAATTCCCGCACAGAAGCTATGGTTT 364128 || || || ||||||||| ||| ||||| |||| || || | | |||||| Sbjct 2005 AAATACGAGAAGGAGGGAAAAGCTAACCGTAA---AATTAAAGCTCAACAATTGTGGTTT 2061 Query 364129 GCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGC 364188 ||||| || || || || |||| || || || || || ||||| || |||||| | || Sbjct 2062 GCCATAATCGAGTCACAAGTTGAAACTGGTACCCCATACATGTTATATAAAGATGCTTGT 2121 Query 364189 AACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAG 364248 || | || || || || || | ||||| || | ||||| || || || || Sbjct 2122 AATAGGAAAAGTAATCAACAAAACGTAGGTACCATAAAATGCAGCAATCTTTGCACAGAA 2181 Query 364249 ATTATTGAATACACCGCTCCCGACGA 364274 || | ||||| | ||||| || || Sbjct 2182 ATAGTAGAATATTCAGCTCCGGATGA 2207 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1301326665618378