Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaselia_20abdita_20[genbank_20GCA_5F001015175.1_202015-05-29] 121,379 sequences; 412,270,594 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq26001 122 7e-23 seq30215 87.8 2e-12 >seq26001 Length=10617 Score = 122 bits (134), Expect = 7e-23 Identities = 156/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 23986 ACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGG 24045 ||| ||||||| | || |||||||| | || || ||| | |||||| | ||||| || Sbjct 8557 ACAGAATGCAAATTTTCGTAAAAACCCTCACGGGTAAAACCATTACCCTAGAAGTAGAAC 8616 Query 24046 CCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCG 24105 | || || |||||| | || ||| |||||| |||||||| || || ||||| | Sbjct 8617 CTTCGGATACTATCGAGAATGTTAAAGCCAAGATTCAAGACAAAGAGGGAATTCCTCCAG 8676 Query 24106 ATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATT 24165 |||| || ||| |||| | || ||||||||||| ||||| | | | | | ||||| Sbjct 8677 ATCAGCAAAGATTGATCTTCGCTGGCAAGCAACTTGAAGACGGCCGTACTCTTTCCGATT 8736 Query 24166 ATAACATTCAAAAAGAATCTACAATTCATTTAGTG 24200 | || || |||||||| ||||| ||||||||||| Sbjct 8737 ACAATATCCAAAAAGAGTCTACTCTTCATTTAGTG 8771 >seq30215 Length=1837 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/211 (70%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || || || || ||||| || | |||||| | || || ||| | | Sbjct 1521 ATGCAGATTTTCGTCAAGACTTTGACTGGTAAGACAATTACCTTGGAGGTTGAGCCTTCC 1580 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 || ||||||||| | ||||| || ||| ||||||||||| || ||||| || ||| Sbjct 1581 GATACCATCGAGAATGTCAAGGCTAAAATTCAAGACAAAGAAGGTATTCCTCCAGACCAA 1640 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAG--AAACGTCAGCGATTATA 24168 ||| | |||| | || || |||||| | ||||| | | | |||| ||||| | Sbjct 1641 CAGCGTTTGATCTTCGCTGGAAAGCAATTGGAAGACGGTCGTACATTGTCA--GATTACA 1698 Query 24169 ACATTCAAAAAGAATCTACAATTCATTTAGT 24199 | |||||||| || || || ||||||| || Sbjct 1699 ATATTCAAAAGGAGTCCACTCTTCATTTGGT 1729 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429299992853745