Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaselia_20abdita_20[genbank_20GCA_5F001015175.1_202015-05-29] 121,379 sequences; 412,270,594 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq30215 129 5e-25 seq26001 116 3e-21 >seq30215 Length=1837 Score = 129 bits (142), Expect = 5e-25 Identities = 158/213 (74%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||||||||| ||||| | || || | || || ||| | || Sbjct 1521 ATGCAGATTTTCGTCAAGACTTTGACTGGTAAGACAATTACCTTGGAGGTTGAGCCTTCC 1580 Query 25059 GACACTATCGAGTCACTGAA-GCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 || || |||||| | || || |||| ||| ||||||||||| ||||| || ||||| Sbjct 1581 GATACCATCGAGAATGTCAAGGCTAAAATTCA-AGACAAAGAAGGTATTCCTCCAGACCA 1639 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 |||||| | || || || || || ||||| ||||| | ||| || || |||||||| Sbjct 1640 ACAGCGTTTGATCTTCGCTGGAAAGCAATTGGAAGACGGTCGTACATTGTCAGATTACAA 1699 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 ||||||||| || ||||| || ||||| || || Sbjct 1700 TATTCAAAAGGAGTCCACTCTTCATTTGGTCCT 1732 >seq26001 Length=10617 Score = 116 bits (128), Expect = 3e-21 Identities = 157/216 (73%), Gaps = 6/216 (3%) Strand=Plus/Plus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 ||||||||| || ||||| || | || |||||| |||| || | ||||| || | || Sbjct 8561 AATGCAAATTTTCGTAAAAACCCTCACGGGTAAAACCATTACCCTAGAAGTAGAACCTTC 8620 Query 25058 TGACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 || ||||||||| | || |||| || | ||| |||||||| || ||||| || || Sbjct 8621 GGATACTATCGAG--AATGTTAAAGCCAAGATTCAA-GACAAAGAGGGAATTCCTCCAGA 8677 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 || || | | || || || ||||| ||| | ||||| | || ||| | |||||| Sbjct 8678 TCAGCAAAGATTGATCTTCGCTGGCAAGCAACTTGAAGACGGCCGTACTCTTTCCGATTA 8737 Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 |||||| |||||||| || || || ||||||||||| Sbjct 8738 CAATATCCAAAAAGAGTCTACTCTTCATTTAGTGCT 8773 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 432686975045885