Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Megaselia_20abdita_20[genbank_20GCA_5F001015175.1_202015-05-29]
121,379 sequences; 412,270,594 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq116385 264 1e-65
seq23435 129 7e-25
seq18648 127 2e-24
>seq116385
Length=1425
Score = 264 bits (292), Expect = 1e-65
Identities = 386/546 (71%), Gaps = 0/546 (0%)
Strand=Plus/Minus
Query 93079 ATTGTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATT 93138
|| |||||| | | |||||||| || | |||||||| | || || | |||||
Sbjct 599 ATGGTACATCATGACGGCAAAGTCACAGTGGAGTCCTTCGTCCCTAGAGATAAGTTCATT 540
Query 93139 GCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACT 93198
| ||| || ||||| || | || || | ||||| | ||| || || | || |||||
Sbjct 539 GGAGAAGGTCAAACCAGGCATCAAACCCCTCTTCTTCAACCAGAAGATCGCGGCGAAACT 480
Query 93199 ACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGC 93258
|| || || || ||||| ||||| ||||| || | || | |||||||| | ||
Sbjct 479 TCCGCTGAAGAAAATGCCTTCAACGGCAGCAAAAGCAATGATTCTCTCGGCAAAGGTGGC 420
Query 93259 GGAATTACTGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGT 93318
||| ||||||| ||||| || ||||| || || || ||||| | ||||||||| |
Sbjct 419 GGATTTACTGCCAATCCAAGACAATGCCCAGTCAGCCTTCTTCTTCACACAAGGTAGATT 360
Query 93319 TTCGATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAA 93378
|||| |||||| || ||| | |||| || | | ||| || ||||| | ||||||||
Sbjct 359 CTCGACAGCGTTGAAGAGGAAGTCTCTTTCCTGTGGATCGCGGATGTAAGAGTCGATTAA 300
Query 93379 CAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCT 93438
| | |||||||| || ||||| |||||||| ||||| ||||| || |||||||| |
Sbjct 299 AATACTGTACATTTCCGAGTGGACGTTCTCCATAGCAATCTGGAACCCATAGAAACAGCG 240
Query 93439 AGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACC 93498
|||||| || ||||| ||||| || | || | || || | ||||||||||| || ||
Sbjct 239 AGCTTCAGTAATCTGGACTTCCTGGGTGAAACGTTCCACCAAGTTTTCATTGACAATGCC 180
Query 93499 ATCGGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAAG 93558
|||||| || || || |||||||| | || || || || ||||| | || |
Sbjct 179 ATCGGAAGCGGCGAAGAAAGCCAAAACGTGGGAAATGAAGTGCTTCTCTCCGGAATTCAA 120
Query 93559 CTTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGC 93618
||| ||||| |||| | | || || || |||||||| || || |||||||| ||||| ||
Sbjct 119 CTTCTCCCAGTCGGCTTGGTCCTTGGATAGATCGACCTCCTCCACAGTCCAGAACGAAGC 60
Query 93619 TTCTGC 93624
|| ||
Sbjct 59 CTCCGC 54
>seq23435
Length=33132
Score = 129 bits (142), Expect = 7e-25
Identities = 82/88 (93%), Gaps = 2/88 (2%)
Strand=Plus/Plus
Query 126264 CAGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAG 126321
||||||||||||||||| |||||||||||||||||||||| |||||||||| |||||
Sbjct 5646 CAGTCAGGTTGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGAGAGGGAG 5705
Query 126322 CGTGGGTTCGAACCCCACACCTGACAAA 126349
||||||||||||||||||||||||||||
Sbjct 5706 CGTGGGTTCGAACCCCACACCTGACAAA 5733
Score = 127 bits (140), Expect = 2e-24
Identities = 81/87 (93%), Gaps = 2/87 (2%)
Strand=Plus/Plus
Query 126264 CAGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAG 126321
||||||||||||||||| |||||||||||||||||||||| |||||||||| |||||
Sbjct 4926 CAGTCAGGTTGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGAGAGGGAG 4985
Query 126322 CGTGGGTTCGAACCCCACACCTGACAA 126348
|||||||||||||||||||||||||||
Sbjct 4986 CGTGGGTTCGAACCCCACACCTGACAA 5012
Score = 127 bits (140), Expect = 2e-24
Identities = 81/87 (93%), Gaps = 2/87 (2%)
Strand=Plus/Plus
Query 126264 CAGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAG 126321
||||||||||||||||| |||||||||||||||||||||| |||||||||| |||||
Sbjct 5106 CAGTCAGGTTGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGAGAGGGAG 5165
Query 126322 CGTGGGTTCGAACCCCACACCTGACAA 126348
|||||||||||||||||||||||||||
Sbjct 5166 CGTGGGTTCGAACCCCACACCTGACAA 5192
Score = 127 bits (140), Expect = 2e-24
Identities = 81/87 (93%), Gaps = 2/87 (2%)
Strand=Plus/Plus
Query 126264 CAGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAG 126321
||||||||||||||||| |||||||||||||||||||||| |||||||||| |||||
Sbjct 5286 CAGTCAGGTTGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGAGAGGGAG 5345
Query 126322 CGTGGGTTCGAACCCCACACCTGACAA 126348
|||||||||||||||||||||||||||
Sbjct 5346 CGTGGGTTCGAACCCCACACCTGACAA 5372
Score = 127 bits (140), Expect = 2e-24
Identities = 81/87 (93%), Gaps = 2/87 (2%)
Strand=Plus/Plus
Query 126264 CAGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAG 126321
||||||||||||||||| |||||||||||||||||||||| |||||||||| |||||
Sbjct 5466 CAGTCAGGTTGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGAGAGGGAG 5525
Query 126322 CGTGGGTTCGAACCCCACACCTGACAA 126348
|||||||||||||||||||||||||||
Sbjct 5526 CGTGGGTTCGAACCCCACACCTGACAA 5552
Score = 123 bits (136), Expect = 3e-23
Identities = 79/85 (93%), Gaps = 2/85 (2%)
Strand=Plus/Plus
Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGCG 126323
||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||
Sbjct 4768 GTCAGGTTGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGAGAGGGAGCG 4827
Query 126324 TGGGTTCGAACCCCACACCTGACAA 126348
|||||||||||||||||||||||||
Sbjct 4828 TGGGTTCGAACCCCACACCTGACAA 4852
>seq18648
Length=22380
Score = 127 bits (140), Expect = 2e-24
Identities = 81/87 (93%), Gaps = 2/87 (2%)
Strand=Plus/Minus
Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322
|||||||||||||||| |||||||||||||||||||||| |||||||||| ||||||
Sbjct 19460 AGTCAGGTTGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGAGAGGGAGC 19401
Query 126323 GTGGGTTCGAACCCCACACCTGACAAA 126349
|||||||||||||||||||||||||||
Sbjct 19400 GTGGGTTCGAACCCCACACCTGACAAA 19374
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556015909911960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |