Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaselia_20abdita_20[genbank_20GCA_5F001015175.1_202015-05-29] 121,379 sequences; 412,270,594 total letters Query= NC_008584.1 Length=152372 Score E Sequences producing significant alignments: (Bits) Value seq120581 86.0 6e-12 >seq120581 Length=1511 Score = 86.0 bits (94), Expect = 6e-12 Identities = 152/217 (70%), Gaps = 16/217 (7%) Strand=Plus/Minus Query 12038 AATTTAGCCTTTCTCATTGGAGGAGCGAACTTGTTTTTCTCGACTTTTACATGAACTTCA 12097 ||||| |||| ||| | ||||||||||| || ||||| | ||||| || |||| Sbjct 405 AATTTTGCCTCTCTAAATGGAGGAGCGACTTTATTTTTTACAACTTTAACTCTCGTTTCA 346 Query 12098 TCTCC---AATTTCTCCATCTTCGTCTTTTATCGG-----CTTTTTGCGCATATTAAGTC 12149 | || ||| | || |||| || ||||||| ||||| | |||| ||||| Sbjct 345 TTACCCGTAATAT-TC--TCTTTATCCTTTATCGCACCAACTTTT--CTTATATCAAGTC 291 Query 12150 TAAGAGAGGAGAAAAATTTTAAAGCTCTACCACCTGGAGTGGTTTCTGGATTTCCATA-- 12207 | | ||| | | |||||||| || | ||||| | || ||||| ||||||||||| Sbjct 290 TTATAGAAGTATAGAATTTTAACGCATTTCCACCAGTGGTAGTTTCAGGATTTCCATATA 231 Query 12208 -AACTCCTATTTTTTCACGAATTTGGTTAATAAACAT 12243 ||||||||||| |||||||||||| ||||| || Sbjct 230 CTACTCCTATTTTCATACGAATTTGGTTGATAAATAT 194 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 486722803766880