Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaselia_20abdita_20[genbank_20GCA_5F001015175.1_202015-05-29] 121,379 sequences; 412,270,594 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq64146 102 2e-16 seq115411 100 6e-16 seq99071 100 6e-16 seq77590 100 6e-16 seq69518 100 6e-16 seq59272 100 6e-16 seq50303 100 6e-16 seq36856 100 6e-16 seq17783 100 6e-16 seq60384 98.7 2e-15 seq53253 98.7 2e-15 seq33927 98.7 2e-15 seq87918 91.5 3e-13 seq114781 89.7 1e-12 seq48112 89.7 1e-12 seq47594 87.8 4e-12 >seq64146 Length=3061 Score = 102 bits (112), Expect = 2e-16 Identities = 67/74 (91%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 142502 TAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGA 142561 |||||||| |||||||||||||||||| | ||||||||||||| | |||||||||||||| Sbjct 888 TAGCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGA 947 Query 142562 GCCCCACATCGGGC 142575 ||||||| | |||| Sbjct 948 GCCCCACGTTGGGC 961 Score = 100 bits (110), Expect = 6e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| | ||||||||||||| | ||||||||||||||| Sbjct 2004 AGCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAG 2063 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 2064 CCCCACGTTGGGC 2076 >seq115411 Length=3891 Score = 100 bits (110), Expect = 6e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| | ||||||||||||| | ||||||||||||||| Sbjct 839 AGCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAG 898 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 899 CCCCACGTTGGGC 911 >seq99071 Length=1107 Score = 100 bits (110), Expect = 6e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| | ||||||||||||| | ||||||||||||||| Sbjct 518 AGCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAG 459 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 458 CCCCACGTTGGGC 446 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| | ||||||||||||| | |||||||||||||||| Sbjct 114 GCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAGC 173 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 174 CCCACGTTGGGC 185 >seq77590 Length=6007 Score = 100 bits (110), Expect = 6e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| | ||||||||||||| | ||||||||||||||| Sbjct 2731 AGCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAG 2672 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 2671 CCCCACGTTGGGC 2659 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| | ||||| ||||||| | |||||||||||||||| Sbjct 2434 GCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTTTTAATCTCGGGGTCGTGGGTTCGAGC 2375 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 2374 CCCACGTTGGGC 2363 >seq69518 Length=2638 Score = 100 bits (110), Expect = 6e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| | ||||||||||||| | ||||||||||||||| Sbjct 195 AGCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAG 254 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 255 CCCCACGTTGGGC 267 >seq59272 Length=1614 Score = 100 bits (110), Expect = 6e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| | ||||||||||||| | ||||||||||||||| Sbjct 787 AGCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAG 846 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 847 CCCCACGTTGGGC 859 >seq50303 Length=5317 Score = 100 bits (110), Expect = 6e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| | ||||||||||||| | ||||||||||||||| Sbjct 4385 AGCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAG 4326 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 4325 CCCCACGTTGGGC 4313 Score = 100 bits (110), Expect = 6e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| | ||||||||||||| | ||||||||||||||| Sbjct 4821 AGCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAG 4762 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 4761 CCCCACGTTGGGC 4749 >seq36856 Length=8663 Score = 100 bits (110), Expect = 6e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| | ||||||||||||| | ||||||||||||||| Sbjct 7774 AGCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAG 7715 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 7714 CCCCACGTTGGGC 7702 >seq17783 Length=8270 Score = 100 bits (110), Expect = 6e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| | ||||||||||||| | ||||||||||||||| Sbjct 3106 AGCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAG 3047 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 3046 CCCCACGTTGGGC 3034 >seq60384 Length=3809 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| | ||||||||||||| | |||||||||||||||| Sbjct 441 GCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAGC 382 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 381 CCCACGTTGGGC 370 >seq53253 Length=10326 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| | ||||||||||||| | |||||||||||||||| Sbjct 9854 GCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAGC 9913 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 9914 CCCACGTTGGGC 9925 >seq33927 Length=5911 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| | ||||||||||||| | |||||||||||||||| Sbjct 5173 GCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAGC 5232 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 5233 CCCACGTTGGGC 5244 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| | ||||||||||||| | |||||||||||||||| Sbjct 5412 GCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAGC 5353 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 5352 CCCACGTTGGGC 5341 >seq87918 Length=6146 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 4971 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 5030 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 5031 CCCCACGTTGGGC 5043 >seq114781 Length=2938 Score = 89.7 bits (98), Expect = 1e-12 Identities = 64/74 (86%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 142050 CATGTCTCTGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCG 142109 || |||||| ||||||| ||| ||||||||||||||||||||||||||| | ||||||| Sbjct 339 CAAGTCTCTTTGGCGCAGCGGATAGCGCGTTGGACTTCTAATCCAAAGGTCGTGGGTTCG 280 Query 142110 ACCCCCGCCAGAGA 142123 | |||| | ||||| Sbjct 279 ATCCCCACAAGAGA 266 >seq48112 Length=4629 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142052 TGTCTCTGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGAC 142111 ||||||| ||||||| ||| ||||||||||||||||||||||||||| | |||||||| Sbjct 1349 TGTCTCTTTGGCGCAGCGGATAGCGCGTTGGACTTCTAATCCAAAGGTCGTGGGTTCGAT 1408 Query 142112 CCCCGCCAGAGA 142123 |||| | ||||| Sbjct 1409 CCCCACAAGAGA 1420 >seq47594 Length=8258 Score = 87.8 bits (96), Expect = 4e-12 Identities = 62/71 (87%), Gaps = 0/71 (0%) Strand=Plus/Minus Query 142053 GTCTCTGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGACC 142112 |||||| ||||||| ||| ||||||||||||||||||||||||||| | |||||||| | Sbjct 4826 GTCTCTTTGGCGCAGCGGATAGCGCGTTGGACTTCTAATCCAAAGGTCGTGGGTTCGATC 4767 Query 142113 CCCGCCAGAGA 142123 ||| | ||||| Sbjct 4766 CCCACAAGAGA 4756 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1026238340649739