Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaselia_20abdita_20[genbank_20GCA_5F001015175.1_202015-05-29] 121,379 sequences; 412,270,594 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq30215 118 9e-22 seq26001 114 1e-20 >seq30215 Length=1837 Score = 118 bits (130), Expect = 9e-22 Identities = 152/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 114174 ACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCA 114233 || ||||| | || || || |||||||| |||||||| || |||||| ||||| Sbjct 1729 ACCAAATGAAGAGTGGACTCCTTTTGAATATTGTAATCTGACAATGTACGACCGTCTTCC 1670 Query 114234 AGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCA 114293 | ||| || |||||| |||| | |||||||||||| |||||||| ||||||||||| | Sbjct 1669 AATTGCTTTCCAGCGAAGATCAAACGCTGTTGGTCTGGAGGAATACCTTCTTTGTCTTGA 1610 Query 114294 ATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTG 114353 || || || | | || | ||| |||| | || || |||| ||| | || || Sbjct 1609 ATTTTAGCCTTGACATTCTCGATGGTATCGGAAGGCTCAACCTCCAAGGTAATTGTCTTA 1550 Query 114354 CCGGTCAGAGTTTTTACAAAAATCTGCATG 114383 || |||| ||| || || |||||||||||| Sbjct 1549 CCAGTCAAAGTCTTGACGAAAATCTGCATG 1520 >seq26001 Length=10617 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214 ||| ||||| || | | |||||||| | ||||| |||||||| || ||||||||| Sbjct 8789 ACCACCACGAAGACGAAGCACTAAATGAAGAGTAGACTCTTTTTGGATATTGTAATCGGA 8730 Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274 | |||||| ||||||||||| || |||||| |||| | | || || || ||||| Sbjct 8729 AAGAGTACGGCCGTCTTCAAGTTGCTTGCCAGCGAAGATCAATCTTTGCTGATCTGGAGG 8670 Query 114275 AATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGAC 114334 ||| || |||||||| |||||| ||| | | || | || || | | ||| || Sbjct 8669 AATTCCCTCTTTGTCTTGAATCTTGGCTTTAACATTCTCGATAGTATCCGAAGGTTCTAC 8610 Query 114335 GTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || | ||| | ||||| || || || |||||||| ||||| ||||| Sbjct 8609 TTCTAGGGTAATGGTTTTACCCGTGAGGGTTTTTACGAAAATTTGCAT 8562 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419512892424948