Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaselia_20abdita_20[genbank_20GCA_5F001015175.1_202015-05-29] 121,379 sequences; 412,270,594 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq116385 161 2e-34 >seq116385 Length=1425 Score = 161 bits (178), Expect = 2e-34 Identities = 295/430 (69%), Gaps = 4/430 (1%) Strand=Plus/Plus Query 42424 TGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCATGA 42483 |||| ||||||||||| || || ||||| |||||||| ||| ||| | |||| Sbjct 157 TGGCTTTCTTCGCCGCTTCCGATGGCATTGTCAATGAAAACTTGGTGGAACGTTTCACCC 216 Query 42484 AAGAGGTGCAG--TACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGAA 42541 | || || ||| |||| || || ||||| ||||| || |||||||| || || ||||| Sbjct 217 AGGAAGTCCAGATTACT--GAAGCTCGCTGTTTCTATGGGTTCCAGATTGCTATGGAGAA 274 Query 42542 CGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGTCGAGCG 42601 ||| ||||| || ||||| | | || || | ||||||| ||||| || | Sbjct 275 CGTCCACTCGGAAATGTACAGTATTTTAATCGACTCTTACATCCGCGATCCACAGGAAAG 334 Query 42602 TAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGC 42661 || || ||||| || | |||| | || || | ||||||||||| |||||||| Sbjct 335 AGACTTCCTCTTCAACGCTGTCGAGAATCTACCTTGTGTGAAGAAGAAGGCTGACTGGGC 394 Query 42662 GCTCAACTGGATCGAGAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGC 42721 | ||||| | ||| ||| || || | |||||| | | || ||| | || Sbjct 395 ATTGTCTTGGATTGGCAGTAAATCCGCCACCTTTGCCGAGAGAATCATTGCTTTTGCTGC 454 Query 42722 CGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGAAGGT 42781 ||| || ||||| |||||| || |||||| | ||||||||| | ||| ||| || Sbjct 455 CGTTGAAGGCATTTTCTTCAGCGGAAGTTTCGCCGCGATCTTCTGGTTGAAGAAGAGGGG 514 Query 42782 GTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAG 42841 | |||||| || | |||||||| || ||||| ||| |||||||| || || || | Sbjct 515 TTTGATGCCTGGTTTGACCTTCTCCAATGAACTTATCTCTAGGGACGAAGGACTCCACTG 574 Query 42842 GGACTTTGCC 42851 ||||||||| Sbjct 575 TGACTTTGCC 584 Score = 100 bits (110), Expect = 5e-16 Identities = 200/296 (68%), Gaps = 3/296 (1%) Strand=Plus/Plus Query 42711 GCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTC 42770 || ||| |||| || || ||||| |||||| || |||||| | ||||||||| | Sbjct 611 GCTTTTGCCGCTGTTGAAGGCATTTTCTTCAGCGGAAGTTTCGCCGCGATCTTCTGGTTG 670 Query 42771 AAGCAGAAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAG 42830 ||| ||| || | |||||| || | |||||||| || ||||| ||| |||||||| Sbjct 671 AAGAAGAGGGGTTTGATGCCTGGTTTGACCTTCTCCAATGAACTTATCTCTAGGGACGAA 730 Query 42831 GGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTCG 42890 || || || | ||||||||| | | ||| | ||| | || | ||| || Sbjct 731 GGACTCCACTGTGACTTTGCCGTCATGATGTACCAT---CACTTGGTCCAAAGGCCATCC 787 Query 42891 AAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACG 42950 ||||| | |||| | |||||| || || || | || || | || ||| | || Sbjct 788 AAGGACAGAATCCGCGAAATCATCCTCGATGCTGTTAAAATTGAACAAGAATTCTTGACT 847 Query 42951 CAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACAT 43006 | | |||||||| ||| ||||||||||| |||||||||| | ||||||| Sbjct 848 AAAGCCCTGCCCGTCAACCTCATCGGCATGAACTGTGACCTCATGTCCCAGTACAT 903 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 942906413153040