Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaselia_20abdita_20[genbank_20GCA_5F001015175.1_202015-05-29] 121,379 sequences; 412,270,594 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq116385 105 8e-18 >seq116385 Length=1425 Score = 105 bits (116), Expect = 8e-18 Identities = 341/523 (65%), Gaps = 10/523 (2%) Strand=Plus/Minus Query 126044 ACGGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGT 126103 |||||||| || |||||| || ||||| | ||||| |||||||| |||||| || Sbjct 586 ACGGCAAAGTCACAGTGGAGTCCTTCGTCCCTAGAGATAAGTTCATTGGAGAAGGTCAAA 527 Query 126104 CCTGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAG 126163 || ||||| | ||||| ||||||||||||||| ||||| || || |||||| Sbjct 526 CCAGGCATCAAACCCCTCTTCTTCAACCAGAAGATCGCGGCGAAACTTCCGCTGAAGAAA 467 Query 126164 ATTCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTCA 126223 || || || || || || |||| || | ||| ||||||| | || || || || Sbjct 466 ATGCCTTCAACGGCAGCAAAAGCAATGATTCTCTCGGCAAAGGTGGCGGATTTACTGCCA 407 Query 126224 AACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCA 126283 | ||| || ||||| | ||||| |||| | ||| || | ||| || || | Sbjct 406 ATCCAAGACAATGCCCAGTCAGCCTTCTTCTTCACACAAGGTAGATTCTCGACAGCGTTG 347 Query 126284 AAGAGTTCCT-TCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGT 126342 ||||| | ||||| ||| |||||| |||||| || || | | || | Sbjct 346 AAGAGGAAGTCTCTTTCCTG-TGGATCGCGGATGTAAGAGTCGATTAAAATACTGTACAT 288 Query 126343 TTCGCCGTGGACCATTTCATTATGGCA--CTGATACGCGTAGAAAGAGCGCGCTTCGCTT 126400 ||| |||||| ||| || ||| ||| || | |||||| |||| ||||| | Sbjct 287 TTCCGAGTGGAC--GTTCTCCATAGCAATCTGGAACCCATAGAAACAGCGAGCTTCAGTA 230 Query 126401 ATCTGTACCTCATCGGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCA 126460 ||||| || || | || ||| | | || ||| ||||| |||||||| | Sbjct 229 ATCTGGACTTCCTGGGTGAAACGTTCCACCAAGTTTTCATTGACAATGCCATCGGAAGCG 170 Query 126461 GCAAAAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCG--TTCAGGGTCTTCC 126518 || || || |||| | | ||||| | | ||| || | |||| ||| || Sbjct 169 GCGAAGAAAGCCAAAACGTGGGAAATGAAGTGC--TTCTCTCCGGAATTCAACTTCTCCC 112 Query 126519 AGTCGTCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 126561 ||||| | | ||||| || ||||| ||||||||| ||||||| Sbjct 111 AGTCGGCTTGGTCCTTGGATAGATCGACCTCCTCCACAGTCCA 69 Score = 87.8 bits (96), Expect = 2e-12 Identities = 78/98 (80%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 126044 ACGGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGT 126103 |||||||| || |||||| || ||||| | ||||| |||||||| |||||| || Sbjct 753 ACGGCAAAGTCACAGTGGAGTCCTTCGTCCCTAGAGATAAGTTCATTGGAGAAGGTCAAA 694 Query 126104 CCTGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGC 126141 || ||||| | ||||| ||||||||||||||| ||||| Sbjct 693 CCAGGCATCAAACCCCTCTTCTTCAACCAGAAGATCGC 656 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596447272717320