Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaselia_20abdita_20[genbank_20GCA_5F001015175.1_202015-05-29] 121,379 sequences; 412,270,594 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq24539 96.9 4e-15 seq42819 91.5 2e-13 seq102446 89.7 6e-13 seq91888 89.7 6e-13 seq72018 89.7 6e-13 seq36856 89.7 6e-13 seq62988 87.8 2e-12 seq56453 87.8 2e-12 seq21263 87.8 2e-12 seq74336 86.0 7e-12 seq35583 86.0 7e-12 seq25447 86.0 7e-12 seq3625 86.0 7e-12 seq66572 84.2 2e-11 seq35644 84.2 2e-11 seq26001 84.2 2e-11 seq12065 84.2 2e-11 seq890 84.2 2e-11 seq86817 82.4 8e-11 >seq24539 Length=7478 Score = 96.9 bits (106), Expect = 4e-15 Identities = 77/92 (84%), Gaps = 2/92 (2%) Strand=Plus/Minus Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057 ||||||| ||||| || | | ||| |||||| ||||||||||||||||||||| |||| Sbjct 2261 AAAAATTATCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 2202 Query 57058 TCACCACTATACTACCGAGGA--TTGAATATA 57087 | |||||||||||| |||||| |||||| || Sbjct 2201 TGACCACTATACTATCGAGGATGTTGAATTTA 2170 >seq42819 Length=15457 Score = 91.5 bits (100), Expect = 2e-13 Identities = 73/88 (83%), Gaps = 0/88 (0%) Strand=Plus/Minus Query 56992 TTTATGAAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGG 57051 |||| |||||| ||||| || | | ||| |||||| ||||||||||||||||||||| Sbjct 3138 TTTAATAAAAATAATCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGG 3079 Query 57052 ACATACTCACCACTATACTACCGAGGAT 57079 ||||| |||||||||||| ||||||| Sbjct 3078 GGATACTGACCACTATACTATCGAGGAT 3051 Score = 89.7 bits (98), Expect = 6e-13 Identities = 66/77 (86%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 57003 TTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACC 57062 |||||||| || | | ||| |||||| ||||||||||||||||||||| ||||| ||| Sbjct 8318 TTTTCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACC 8377 Query 57063 ACTATACTACCGAGGAT 57079 ||||||||| ||||||| Sbjct 8378 ACTATACTATCGAGGAT 8394 Score = 86.0 bits (94), Expect = 7e-12 Identities = 70/84 (83%), Gaps = 2/84 (2%) Strand=Plus/Plus Query 57003 TTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACC 57062 ||| |||| || | | ||| |||||| ||||||||||||||||||||| ||||| ||| Sbjct 9193 TTTCCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACC 9252 Query 57063 ACTATACTACCGAGGA--TTGAAT 57084 ||||||||| |||||| |||||| Sbjct 9253 ACTATACTATCGAGGATGTTGAAT 9276 >seq102446 Length=1555 Score = 89.7 bits (98), Expect = 6e-13 Identities = 69/82 (84%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057 ||| ||| ||||| || | | ||| |||||| ||||||||||||||||||||| |||| Sbjct 771 AAAGATTATCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 712 Query 57058 TCACCACTATACTACCGAGGAT 57079 | |||||||||||| ||||||| Sbjct 711 TGACCACTATACTATCGAGGAT 690 >seq91888 Length=1758 Score = 89.7 bits (98), Expect = 6e-13 Identities = 69/82 (84%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057 ||| ||| ||||| || | | ||| |||||| ||||||||||||||||||||| |||| Sbjct 919 AAAGATTATCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 978 Query 57058 TCACCACTATACTACCGAGGAT 57079 | |||||||||||| ||||||| Sbjct 979 TGACCACTATACTATCGAGGAT 1000 Score = 84.2 bits (92), Expect = 2e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065 ||||| || | | ||| |||||| ||||||||||||||||||||| ||||| |||||| Sbjct 1560 TCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACT 1619 Query 57066 ATACTACCGAGGAT 57079 |||||| ||||||| Sbjct 1620 ATACTATCGAGGAT 1633 >seq72018 Length=1766 Score = 89.7 bits (98), Expect = 6e-13 Identities = 69/82 (84%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057 ||| ||| ||||| || | | ||| |||||| ||||||||||||||||||||| |||| Sbjct 1346 AAAGATTATCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 1405 Query 57058 TCACCACTATACTACCGAGGAT 57079 | |||||||||||| ||||||| Sbjct 1406 TGACCACTATACTATCGAGGAT 1427 >seq36856 Length=8663 Score = 89.7 bits (98), Expect = 6e-13 Identities = 69/82 (84%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057 ||| || |||||| || | | ||| |||||| ||||||||||||||||||||| |||| Sbjct 7548 AAATATATTCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 7607 Query 57058 TCACCACTATACTACCGAGGAT 57079 | |||||||||||| ||||||| Sbjct 7608 TGACCACTATACTATCGAGGAT 7629 >seq62988 Length=14884 Score = 87.8 bits (96), Expect = 2e-12 Identities = 69/83 (83%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057 || || || |||| || | | ||| |||||| ||||||||||||||||||||| |||| Sbjct 9594 AAGAAATTCCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 9535 Query 57058 TCACCACTATACTACCGAGGATT 57080 | |||||||||||| |||||||| Sbjct 9534 TGACCACTATACTATCGAGGATT 9512 >seq56453 Length=1943 Score = 87.8 bits (96), Expect = 2e-12 Identities = 71/85 (84%), Gaps = 2/85 (2%) Strand=Plus/Minus Query 57002 ATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCAC 57061 |||| |||| || | | ||| |||||| ||||||||||||||||||||| ||||| || Sbjct 769 ATTTCCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGAC 710 Query 57062 CACTATACTACCGAGGA--TTGAAT 57084 |||||||||| |||||| |||||| Sbjct 709 CACTATACTATCGAGGATGTTGAAT 685 >seq21263 Length=22879 Score = 87.8 bits (96), Expect = 2e-12 Identities = 74/90 (82%), Gaps = 1/90 (1%) Strand=Plus/Plus Query 56991 GTTTATGAAAA-ATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGC 57049 ||| || |||| | | ||||| || | | ||| |||||| ||||||||||||||||||| Sbjct 2935 GTTCATAAAAATAATGTCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGC 2994 Query 57050 GGACATACTCACCACTATACTACCGAGGAT 57079 || ||||| |||||||||||| ||||||| Sbjct 2995 GGGGATACTGACCACTATACTATCGAGGAT 3024 >seq74336 Length=1927 Score = 86.0 bits (94), Expect = 7e-12 Identities = 70/84 (83%), Gaps = 2/84 (2%) Strand=Plus/Minus Query 56998 AAAAATTTT--CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACAT 57055 ||||||| | |||| || | | ||| |||||| ||||||||||||||||||||| || Sbjct 710 AAAAATTATAACTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGAT 651 Query 57056 ACTCACCACTATACTACCGAGGAT 57079 ||| |||||||||||| ||||||| Sbjct 650 ACTGACCACTATACTATCGAGGAT 627 >seq35583 Length=30480 Score = 86.0 bits (94), Expect = 7e-12 Identities = 68/82 (83%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057 ||| | || |||| || | | ||| |||||| ||||||||||||||||||||| |||| Sbjct 196 AAAGAATTCCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 137 Query 57058 TCACCACTATACTACCGAGGAT 57079 | |||||||||||| ||||||| Sbjct 136 TGACCACTATACTATCGAGGAT 115 >seq25447 Length=6539 Score = 86.0 bits (94), Expect = 7e-12 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065 ||||| || | | ||| |||||| ||||||||||||||||||||| ||||| |||||| Sbjct 3240 TCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACT 3181 Query 57066 ATACTACCGAGGATT 57080 |||||| |||||||| Sbjct 3180 ATACTATCGAGGATT 3166 >seq3625 Length=9568 Score = 86.0 bits (94), Expect = 7e-12 Identities = 75/92 (82%), Gaps = 5/92 (5%) Strand=Plus/Plus Query 56998 AAAAATTTTCTCCTCGGCAA---GAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACA 57054 |||||| || ||||| | | | ||| |||||| ||||||||||||||||||||| | Sbjct 6023 AAAAATATTGTCCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGA 6082 Query 57055 TACTCACCACTATACTACCGAGGA--TTGAAT 57084 |||| |||||||||||| |||||| |||||| Sbjct 6083 TACTGACCACTATACTATCGAGGATGTTGAAT 6114 >seq66572 Length=1444 Score = 84.2 bits (92), Expect = 2e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065 ||||| || | | ||| |||||| ||||||||||||||||||||| ||||| |||||| Sbjct 1084 TCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACT 1143 Query 57066 ATACTACCGAGGAT 57079 |||||| ||||||| Sbjct 1144 ATACTATCGAGGAT 1157 >seq35644 Length=4270 Score = 84.2 bits (92), Expect = 2e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065 ||||| || | | ||| |||||| ||||||||||||||||||||| ||||| |||||| Sbjct 3928 TCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACT 3869 Query 57066 ATACTACCGAGGAT 57079 |||||| ||||||| Sbjct 3868 ATACTATCGAGGAT 3855 >seq26001 Length=10617 Score = 84.2 bits (92), Expect = 2e-11 Identities = 151/218 (69%), Gaps = 2/218 (1%) Strand=Plus/Minus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 ||| | ||| ||||| | || ||| ||||| ||||||||||| | ||||| || | Sbjct 8777 ACGAAGCACTAAATGAAGAGTAGACTCTTTTTGGATATTGTAATCGGAAAGAGTACGGCC 8718 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 ||| || || ||||| |||||||| || | || ||||| || | || | | ||| || Sbjct 8717 GTCTTCAAGTTGCTTGCCAGCGAAGATCAATCTTTGCTGATCTGGAGGAATTCCCTCTTT 8658 Query 42113 GTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGA 42171 || | ||| | || | ||| | || | | || || | ||| || || | || | Sbjct 8657 GT-CTTGAATCTTGGCTTTAACATTCTCGATAGTATCCGAAGGTTCTACTTCTAGGGTAA 8599 Query 42172 TGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 42209 ||||||| ||||| || || ||||| || ||||||||| Sbjct 8598 TGGTTTTACCCGTGAGGGTTTTTACGAAAATTTGCATT 8561 >seq12065 Length=3532 Score = 84.2 bits (92), Expect = 2e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065 ||||| || | | ||| |||||| ||||||||||||||||||||| ||||| |||||| Sbjct 1275 TCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACT 1216 Query 57066 ATACTACCGAGGAT 57079 |||||| ||||||| Sbjct 1215 ATACTATCGAGGAT 1202 >seq890 Length=12668 Score = 84.2 bits (92), Expect = 2e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065 ||||| || | | ||| |||||| ||||||||||||||||||||| ||||| |||||| Sbjct 4953 TCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACT 5012 Query 57066 ATACTACCGAGGAT 57079 |||||| ||||||| Sbjct 5013 ATACTATCGAGGAT 5026 >seq86817 Length=2164 Score = 82.4 bits (90), Expect = 8e-11 Identities = 69/84 (82%), Gaps = 2/84 (2%) Strand=Plus/Plus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| || | | ||| |||||| ||||||||||||||||||||| ||||| ||||| | Sbjct 271 CTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACCA 330 Query 57067 TACTACCGAGGA--TTGAATATAT 57088 ||||| |||||| ||||||| || Sbjct 331 TACTATCGAGGATGTTGAATAAAT 354 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 542388617169360