Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaselia_20abdita_20[genbank_20GCA_5F001015175.1_202015-05-29] 121,379 sequences; 412,270,594 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq26001 129 6e-25 seq30299 82.4 8e-11 >seq26001 Length=10617 Score = 129 bits (142), Expect = 6e-25 Identities = 159/215 (74%), Gaps = 2/215 (1%) Strand=Plus/Minus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 |||||||| ||||| || || |||||||| || |||||||| | | || || |||| Sbjct 8774 AAGCACTAAATGAAGAGTAGACTCTTTTTGGATATTGTAATCGGAAAGAGTACGGCCGTC 8715 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 |||||| |||||||| || | || | | ||||| || ||||||||||| ||||| || Sbjct 8714 TTCAAGTTGCTTGCCAGCGAAGATCAATCTTTGCTGATCTGGAGGAATTCCCTCTTTGTC 8655 Query 64351 TTGTATTTTTTGCTTTA-CAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGG 64409 ||| || || |||||| || ||| | ||||| | || ||||||| || | || Sbjct 8654 TTGAATCTTG-GCTTTAACATTCTCGATAGTATCCGAAGGTTCTACTTCTAGGGTAATGG 8596 Query 64410 TCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444 | || || || | ||||||||||||||||||||| Sbjct 8595 TTTTACCCGTGAGGGTTTTTACGAAAATTTGCATT 8561 >seq30299 Length=8930 Score = 82.4 bits (90), Expect = 8e-11 Identities = 105/145 (72%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 34440 AACCGGGCAAACGTCGTTGGCTTAAAATTAAAAAAGACTATCTATGTAACGGCGAAATGG 34499 |||| || |||||| ||||||||||| | ||||| || ||| |||| | || |||||| Sbjct 4944 AACCCGGAAAACGTGGTTGGCTTAAAGTGAAAAAGGATTATTTATGCGAAGGTCAAATGG 5003 Query 34500 CGGATTCGATTGATTTAGTCGTGCTGGGCGCTCAGATGGGTACTGGGAAAAAAGGAGGTC 34559 | ||| | |||||| || || |||| | | | |||||||| || ||||| ||| Sbjct 5004 CTGATACTGCTGATTTGGTTGTATTGGGTGGATGGTTTGGTACTGGAAAGAAAGGTGGTA 5063 Query 34560 AATTGTCGATATTTTTGATGGGATG 34584 || || |||||||||||||| Sbjct 5064 TGCTGAGTATCTTTTTGATGGGATG 5088 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 498886720172760