Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaselia_20abdita_20[genbank_20GCA_5F001015175.1_202015-05-29] 121,379 sequences; 412,270,594 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq26001 156 3e-33 seq30215 132 3e-26 seq63354 114 9e-21 >seq26001 Length=10617 Score = 156 bits (172), Expect = 3e-33 Identities = 160/209 (77%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027 ||||||||||| ||||| |||||||| || ||||||||| ||| | | ||||||| Sbjct 8770 ACTAAATGAAGAGTAGACTCTTTTTGGATATTGTAATCGGAAAGAGTACGGCCGTCTTCA 8711 Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087 | ||| ||||||||| | ||||| | || || || |||||||| || ||||| | Sbjct 8710 AGTTGCTTGCCAGCGAAGATCAATCTTTGCTGATCTGGAGGAATTCCCTCTTTGTCTTGA 8651 Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147 || ||| ||| ||| | || |||||||| | |||||| |||| ||||||||||||| Sbjct 8650 ATCTTGGCTTTAACATTCTCGATAGTATCCGAAGGTTCTACTTCTAGGGTAATGGTTTTA 8591 Query 15148 CCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || || || |||||||| ||||||||||| Sbjct 8590 CCCGTGAGGGTTTTTACGAAAATTTGCAT 8562 >seq30215 Length=1837 Score = 132 bits (146), Expect = 3e-26 Identities = 157/211 (74%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCG--CGTCTT 15025 || |||||||| || || || ||||| || |||||||| ||| ||| || |||||| Sbjct 1729 ACCAAATGAAGAGTGGACTCCTTTTGAATATTGTAATC--TGACAATGTACGACCGTCTT 1672 Query 15026 CTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCAC 15085 | ||||| || |||||| | ||||||||||||||||| ||||| ||||| ||||| Sbjct 1671 CCAATTGCTTTCCAGCGAAGATCAAACGCTGTTGGTCTGGAGGAATACCTTCTTTGTCTT 1612 Query 15086 AAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTT 15145 |||||| || ||| | || || |||||| | || || || |||||||| || | Sbjct 1611 GAATTTTAGCCTTGACATTCTCGATGGTATCGGAAGGCTCAACCTCCAAGGTAATTGTCT 1552 Query 15146 TACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 |||| |||| ||| || || ||||| ||||| Sbjct 1551 TACCAGTCAAAGTCTTGACGAAAATCTGCAT 1521 >seq63354 Length=4016 Score = 114 bits (126), Expect = 9e-21 Identities = 155/214 (72%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 14965 AAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCG--CGT 15022 || || || |||||||| || || ||||| |||||||| ||| || || || ||| Sbjct 1985 AACACCAAGTGAAGGGTGGACTCCTTTTGGATGTTGTAGTCG--GACAAGGTGCGTCCGT 1928 Query 15023 CTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGT 15082 |||| ||||| || |||||| | |||||||| ||||| || ||| ||||| || |||| Sbjct 1927 CTTCCAATTGCTTTCCAGCGAAGATCAAACGTTGTTGATCTGGTGGGATTCCCTCTTTGT 1868 Query 15083 CACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGG 15142 | || ||| || ||| |||| || || ||| | ||| || || |||||||||| Sbjct 1867 CTTGGATCTTGGCCTTGACATTTTCAATGGTGTCGGAAGGTTCGACTTCCAAGGTAATGG 1808 Query 15143 TTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 | ||||| || || || || || || || ||||| Sbjct 1807 TCTTACCAGTAAGGGTCTTGACGAAGATCTGCAT 1774 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356863307669015