Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaselia_20abdita_20[genbank_20GCA_5F001015175.1_202015-05-29] 121,379 sequences; 412,270,594 total letters Query= NC_011588.1 Length=127615 Score E Sequences producing significant alignments: (Bits) Value seq17978 87.8 1e-12 >seq17978 Length=31805 Score = 87.8 bits (96), Expect = 1e-12 Identities = 99/133 (74%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 69589 AGACCATTTATTCGAGAGTCGCTCGTGTCTGCAAAAATGATCACGGCGGCCCACATCGGT 69648 |||| || ||||||||||| ||||| || |||||| ||| | || || || ||||| | Sbjct 28056 AGACAATATATTCGAGAGTTGCTCGAGTTTGCAAATGGGATAAAGGAGGTCCTCATCGAT 27997 Query 69649 ACTCGGATAAATGGACGTCATTTTTAAAGACTCGACTAAATTGTTCGGTGCCCGGCGAAT 69708 | | | | |||||| || || ||||| ||||||| || |||||| | || ||||| | Sbjct 27996 TCAGGAACAGATGGACATCCTTCTTAAAATCTCGACTTAACTGTTCGATACCAGGCGACT 27937 Query 69709 TCCCCTTTTACTT 69721 || |||||||| Sbjct 27936 ATCCGTTTTACTT 27924 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 407639283155144