Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaselia_20abdita_20[genbank_20GCA_5F001015175.1_202015-05-29] 121,379 sequences; 412,270,594 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq116385 105 8e-18 >seq116385 Length=1425 Score = 105 bits (116), Expect = 8e-18 Identities = 341/523 (65%), Gaps = 10/523 (2%) Strand=Plus/Minus Query 127517 ACAGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGA 127576 || ||||| || |||||| || ||||| | ||||| |||||||| |||||| || | Sbjct 586 ACGGCAAAGTCACAGTGGAGTCCTTCGTCCCTAGAGATAAGTTCATTGGAGAAGGTCAAA 527 Query 127577 CCTGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAG 127636 || ||||| | ||||| ||||||||||||||| ||||| || || |||||| Sbjct 526 CCAGGCATCAAACCCCTCTTCTTCAACCAGAAGATCGCGGCGAAACTTCCGCTGAAGAAA 467 Query 127637 ATCCCCTCCACACACGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGTATCA 127696 || || || || || || |||| | | ||||||||||| | ||| || | || Sbjct 466 ATGCCTTCAACGGCAGCAAAAGCAATGATTCTCTCGGCAAAGGTGGCGGATTTACTGCCA 407 Query 127697 AACCACTTCATCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCA 127756 | ||| || ||||| | ||||| |||| | ||| || | ||| || || | Sbjct 406 ATCCAAGACAATGCCCAGTCAGCCTTCTTCTTCACACAAGGTAGATTCTCGACAGCGTTG 347 Query 127757 AAGAGTTCCT-TCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGT 127815 ||||| | ||||| ||| |||||| |||||| || || | | || | Sbjct 346 AAGAGGAAGTCTCTTTCCTG-TGGATCGCGGATGTAAGAGTCGATTAAAATACTGTACAT 288 Query 127816 TTCGCCGTGGACCATTTCATTATGGCA--CTGATACGCGTAGAAAGAGCGCGCTTCGCTT 127873 ||| |||||| ||| || ||| ||| || | |||||| |||| ||||| | Sbjct 287 TTCCGAGTGGAC--GTTCTCCATAGCAATCTGGAACCCATAGAAACAGCGAGCTTCAGTA 230 Query 127874 ATCTGTACCTCATCGGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCA 127933 ||||| || || | || ||| | | || ||| ||||| |||||||| | Sbjct 229 ATCTGGACTTCCTGGGTGAAACGTTCCACCAAGTTTTCATTGACAATGCCATCGGAAGCG 170 Query 127934 GCAAAAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCG--TTCAGGGTCTTCC 127991 || || || |||| | | ||||| | | ||| || | |||| ||| || Sbjct 169 GCGAAGAAAGCCAAAACGTGGGAAATGAAGTGC--TTCTCTCCGGAATTCAACTTCTCCC 112 Query 127992 AGTCGTCGAGATCCTTTGAGAGATCTACCTCCTCCGCAGTCCA 128034 ||||| | | ||||| || ||||| ||||||||| ||||||| Sbjct 111 AGTCGGCTTGGTCCTTGGATAGATCGACCTCCTCCACAGTCCA 69 Score = 87.8 bits (96), Expect = 2e-12 Identities = 78/98 (80%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 127517 ACAGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGA 127576 || ||||| || |||||| || ||||| | ||||| |||||||| |||||| || | Sbjct 753 ACGGCAAAGTCACAGTGGAGTCCTTCGTCCCTAGAGATAAGTTCATTGGAGAAGGTCAAA 694 Query 127577 CCTGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGC 127614 || ||||| | ||||| ||||||||||||||| ||||| Sbjct 693 CCAGGCATCAAACCCCTCTTCTTCAACCAGAAGATCGC 656 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 612576363869640