Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaselia_20abdita_20[genbank_20GCA_5F001015175.1_202015-05-29] 121,379 sequences; 412,270,594 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq24307 107 2e-18 >seq24307 Length=12971 Score = 107 bits (118), Expect = 2e-18 Identities = 197/285 (69%), Gaps = 8/285 (3%) Strand=Plus/Plus Query 13710 TGGCTCGTAAAGAATTACCGCGAGTCTTACGGACTGTTTGCATGCTCCGGAATCCTCTTC 13769 ||| ||||| ||| ||| | || ||||| | || || ||| |||||||| ||| Sbjct 4251 TGGATCGTAGTGAACTACAGAGAAGCTTACAATTTATTCGCCTGCAATGGAATCCTTTTC 4310 Query 13770 AACCATGAATCACCGAGACGAGGTGCAGACTTTGTGACCATGAAGATTACCGAGG---GT 13826 ||||| ||||| || ||| |||| | | ||||||| || | ||| || || ||| || Sbjct 4311 AACCACGAATCTCCTAGAAGAGGAGAAAACTTTGTTACAAGGAAAATCACA-AGGTCTGT 4369 Query 13827 ATCAAACAAATCATGAAGGGTGAAAAGGAGTTCATTGAATTGGGTAACATAAACGCGGAG 13886 | || | ||| | | || || ||||| | | ||| |||| || | || | | Sbjct 4370 GGCTAAAATATCTTTA--GGACAATTGGAGTGCTTCGAACTGGGCAATCTCGACTCCAAA 4427 Query 13887 AGAGATTGGGGTCACGCGAAGGACTATGTTGAAGCTATGTGGCTCATGCTTCAACAAGAG 13946 ||||||||||| ||||| || ||||| ||||| ||||||||| | ||||| ||| || Sbjct 4428 AGAGATTGGGGACACGCCAAAGACTACGTTGAGGCTATGTGGATGATGCTGCAATGTGAT 4487 Query 13947 GAAGCCGACGAATATGTAGTAGCAACGGGTGAGACCCATTCAGTG 13991 || || || | ||| |||| || || |||||||| ||||| Sbjct 4488 AAACCCAGTGATTTTGTTATAGCTACTGGAGAGACCCA--CAGTG 4530 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 619800586352880