Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaselia_20abdita_20[genbank_20GCA_5F001015175.1_202015-05-29] 121,379 sequences; 412,270,594 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq24307 102 1e-16 seq116385 96.9 4e-15 >seq24307 Length=12971 Score = 102 bits (112), Expect = 1e-16 Identities = 167/237 (70%), Gaps = 8/237 (3%) Strand=Plus/Plus Query 7065 GGAATCCTCTTCAACCATGAATCACCGAGACGAGGTGCAGACTTTGTCACAAAGAAGATT 7124 |||||||| |||||||| ||||| || ||| |||| | | ||||||| |||| ||| || Sbjct 4299 GGAATCCTTTTCAACCACGAATCTCCTAGAAGAGGAGAAAACTTTGTTACAAGGAAAATC 4358 Query 7125 ACCGAGG---GTATCAAACAAATCATGAAGGGTGAAAAGGAGTTCATTGAATTGGGTAAC 7181 || ||| || | || | ||| | | || || ||||| | | ||| |||| || Sbjct 4359 ACA-AGGTCTGTGGCTAAAATATCTTTA--GGACAATTGGAGTGCTTCGAACTGGGCAAT 4415 Query 7182 ATAAACGCGGAGAGAGATTGGGGTCACGCGAAGGACTATGTTGAAGCCATGTGGCTCATG 7241 | || | | ||||||||||| ||||| || ||||| ||||| || |||||| | ||| Sbjct 4416 CTCGACTCCAAAAGAGATTGGGGACACGCCAAAGACTACGTTGAGGCTATGTGGATGATG 4475 Query 7242 CTTCAACAAGAGGAAGCCGACGAATATGTAGTAGCAACGGGTGAGACCCATTCAGTG 7298 || ||| || || || || | ||| |||| || || |||||||| ||||| Sbjct 4476 CTGCAATGTGATAAACCCAGTGATTTTGTTATAGCTACTGGAGAGACCCA--CAGTG 4530 >seq116385 Length=1425 Score = 96.9 bits (106), Expect = 4e-15 Identities = 155/223 (70%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 117271 ACGGCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGG 117330 |||||||| || |||||| || || || | || ||||||||||| |||||| | Sbjct 586 ACGGCAAAGTCACAGTGGAGTCCTTCGTCCCTAGAGATAAGTTCATTGGAGAAGGTCAAA 527 Query 117331 CCTGGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAG 117390 || ||||| | ||||| |||||||||||| | || ||| ||| ||| |||||| Sbjct 526 CCAGGCATCAAACCCCTCTTCTTCAACCAGAAGATCGCGGCGAAACTTCCGCTGAAGAAA 467 Query 117391 ATACCCTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGTGTCA 117450 || || || || ||||| |||| | | |||||| |||| | || || || || Sbjct 466 ATGCCTTCAACGGCAGCAAAAGCAATGATTCTCTCGGCAAAGGTGGCGGATTTACTGCCA 407 Query 117451 AACCATTTCATTGCCCATTTCGCCTTCTTCTCAATACATGGTA 117493 | ||| || |||||| | |||||||||| | ||| |||| Sbjct 406 ATCCAAGACAATGCCCAGTCAGCCTTCTTCTTCACACAAGGTA 364 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589085659005960