Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaselia_20abdita_20[genbank_20GCA_5F001015175.1_202015-05-29] 121,379 sequences; 412,270,594 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq114749 100 3e-16 >seq114749 Length=5030 Score = 100 bits (110), Expect = 3e-16 Identities = 195/282 (69%), Gaps = 17/282 (6%) Strand=Plus/Plus Query 153717 TTGATGCAACCTGTAGGTGAGTGGGGATTTGATATTGCTGTAGGTAGTATGCAAAGGTTT 153776 |||| || ||| |||||| | ||| ||| || ||||| || | ||| | | Sbjct 1642 TTGAGGCCACC---AGGTGAATTCGGAGCTGACATGGCTGTCGGAACATCTCAACGTCTC 1698 Query 153777 GGTATTCCTATGGGATATGGAGGTCCTCATGCTGCATTCTT----TGCAACAACAGACAA 153832 ||| | || | |||||||| ||||| ||||||| ||||| ||||| ||| || Sbjct 1699 GGTGTACCATTAGGATATGGTGGTCCACATGCTGGGTTCTTCGCGTGCAA--ACA---AA 1753 Query 153833 GTATAA-GAGAAAGATACCTGGCAGAATTGTAGGTCAGTCAGTAGA--TAGTGAAGGTAA 153889 || || | | || || || ||||| | || ||||| ||| || ||| || || Sbjct 1754 GTTTAGTGCGTTTGACTCCAGGAAGAATGATTGG--AGTCACCAGAGATATTGACGGCAA 1811 Query 153890 TAAAGCATACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGGAGAGACAAAGCAAC 153949 | || ||||||||||| || || ||||||||||| ||||| | | |||||||| || Sbjct 1812 CGATGCTTACAGATTAGCTCTTCAAACTAGAGAGCAACATATTCGTCGCGACAAAGCCAC 1871 Query 153950 CAGTAACATCTGCACAGCTCAGGCACTGCTGGCTAATATGTC 153991 ||||| ||||||||||||||||| | | || || ||||| Sbjct 1872 TAGTAATATCTGCACAGCTCAGGCTTTATTAGCCAACATGTC 1913 Score = 87.8 bits (96), Expect = 2e-12 Identities = 126/176 (72%), Gaps = 4/176 (2%) Strand=Plus/Plus Query 153255 AACGTTCTTGAGAATCCTAGTTGG--TACACATCTTACACTCCCTATCAAGCTGAGATAT 153312 ||| || ||||||||||| ||||| ||| || || || || |||||| |||| || Sbjct 1186 AACATTTTTGAGAATCCTGGTTGGACTACTCA--GTATACCCCATATCAACCTGAAATCG 1243 Query 153313 CTCAGGGAAGATTGGAAGCTTTATTCAATTACCAAACGCTCATCACAGAACTTACAGGAT 153372 |||||||| | ||||| | | |||| || || || || | | || | || || | Sbjct 1244 CTCAGGGACGTTTGGAGTCCCTTCTCAACTATCAGACTCTAGTTTCCGACTTGACTGGCT 1303 Query 153373 TACCAATAGCAAACGCATCTCTATTAGATGAAGCAACTGCAGCAGCAGAAGCAATG 153428 | | |||||||||| ||| | || ||||||| ||||| |||||||| |||||| Sbjct 1304 TGGAAGTAGCAAACGCTTCTTTGTTGGATGAAGGTACTGCCGCAGCAGAGGCAATG 1359 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578333996619360