Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaselia_20abdita_20[genbank_20GCA_5F001015175.1_202015-05-29] 121,379 sequences; 412,270,594 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq114749 87.8 2e-12 >seq114749 Length=5030 Score = 87.8 bits (96), Expect = 2e-12 Identities = 192/282 (68%), Gaps = 17/282 (6%) Strand=Plus/Plus Query 158392 TTGATGCAACCTGTAGGTGAGTGGGGATTTGACATTGCTGTAGGTAGTATGCAAAGGTTT 158451 |||| || ||| |||||| | ||| |||||| ||||| || | ||| | | Sbjct 1642 TTGAGGCCACC---AGGTGAATTCGGAGCTGACATGGCTGTCGGAACATCTCAACGTCTC 1698 Query 158452 GGTATTCCTATGGGATACGGAGGTCCTCATGCTGCATTCTT----TGCAACAACAGACAA 158507 ||| | || | ||||| || ||||| ||||||| ||||| ||||| ||| || Sbjct 1699 GGTGTACCATTAGGATATGGTGGTCCACATGCTGGGTTCTTCGCGTGCAA--ACA---AA 1753 Query 158508 GTATAA-GAGAAAGATACCTGGCAGAATTGTAGGTCAGTCAGTAGA--TAGCGAAGGTAA 158564 || || | | || || || ||||| | || ||||| ||| || || || || Sbjct 1754 GTTTAGTGCGTTTGACTCCAGGAAGAATGATTGG--AGTCACCAGAGATATTGACGGCAA 1811 Query 158565 TAAAGCATACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGAAGAGACAAAGCAAC 158624 | || ||||||||||| || || ||||||||||| ||||| | | |||||||| || Sbjct 1812 CGATGCTTACAGATTAGCTCTTCAAACTAGAGAGCAACATATTCGTCGCGACAAAGCCAC 1871 Query 158625 CAGTAACATCTGCACAGCACAAGCACTGCTGGCTAATATGTC 158666 ||||| ||||||||||| || || | | || || ||||| Sbjct 1872 TAGTAATATCTGCACAGCTCAGGCTTTATTAGCCAACATGTC 1913 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 587158986667440