Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaselia_20abdita_20[genbank_20GCA_5F001015175.1_202015-05-29] 121,379 sequences; 412,270,594 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq82395 183 2e-41 >seq82395 Length=2084 Score = 183 bits (202), Expect = 2e-41 Identities = 454/686 (66%), Gaps = 10/686 (1%) Strand=Plus/Plus Query 29709 GAAATCCTCTGCCTTAAAGTCGTCCAGGTTCTCCACCCTCCTGTTTATCCTCAGTGTGGG 29768 |||||| || || ||||| || | || || || | | |||||| |||| | || Sbjct 517 GAAATCTTCGAATTTGAAGTCCTCGATTTTTTCAACTTTACGGTTTATGACCAGTTTAGG 576 Query 29769 AAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGTAGAC 29828 || ||||| || | |||| ||||| |||| |||||||| |||| | ||| || Sbjct 577 GAATGGTCTTGGAACTCTCTTCAGCTGTTCTTTCAAAGGTTCCACATGATTCTTGTAAAC 636 Query 29829 GTGAGCGTCTCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCAT 29888 ||||| |||||| | | ||| ||||| || ||| | ||| ||| || || || || Sbjct 637 GTGAGTGTCTCCGAAAGAGTGAACAAAGTCGCCCACCTTTAGTCCGCAAACATGGGCAAT 696 Query 29889 CATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCC 29948 |||||| || | | | || ||||| || || || || || || ||||| | || | Sbjct 697 CATGTAGGTCAACAATGCATAACTGGCAATATTGAACGGAACTCCAAGCCCAACATCGGC 756 Query 29949 CGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCTCACGTAAAACTGACACATGGT 30008 || |||||||| | | ||| ||||| || | | ||||| |||||| | Sbjct 757 AGATCTCTGGTACATCAAACATGAGAGTTCGTCCCCTTGAACGTAGAACTGAGCGAAACA 816 Query 30009 GTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGATGAT 30068 || || ||||| | |||||| | | ||| ||| |||||||| ||| || Sbjct 817 ATGACAAGGAGGCAAAGCCATTTTGGGGAGGTCCACGGGATTCCAGGCAGACATACAAAT 876 Query 30069 GCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTTTTGCAGCTGATCCACCCC 30128 || ||||| ||||| ||| |||| | | | ||| | ||| || || || || Sbjct 877 CCGTCTGTCCGTAGGGTTATTCTTGATTCTCTGAATGACGTCATTCAGTTGGTCTACGCC 936 Query 30129 CATCCCCGAGTAGTCTGCCCTCATGTCCG----TGTACTCTGCTCCGAAATGCCTCCACT 30184 | | ||||| || || | | | ||||||||||||||||| | ||| | Sbjct 937 TTTGTTGGTATAGTCA----TCGTGACAGGTTTTATACTCTGCTCCGAAATGACGCCATT 992 Query 30185 GGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCA 30244 |||| ||||| |||||||||||||| |||||||| |||| ||| || | |||||||| Sbjct 993 GGAATCCGTAGACCGGTCCCAGGTCACCCTCTTCTCTGTCGGTGAATCCACACTTGTCCA 1052 Query 30245 AAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTC-GGAGAGCTCTTTG 30303 |||| ||||||| || ||| ||||||| || | || |||||| | || || ||| Sbjct 1053 AAAACTCTCTGGTACTATTGCCGTCCCAAATTCTCACATTCTTCTCTTGCAAGATC-TTG 1111 Query 30304 GAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAAAAGACC 30363 | || || ||| | | ||||||| ||||||||| |||| | |||| || || Sbjct 1112 GCATTGGTCTGACCTTTTATAAACCACAAAAGCTCCTCCGCGACTCCTCTCCAGAAAACT 1171 Query 30364 CTCTTGGTCGTGAGGAGGGGAAACTG 30389 || || || || | | |||||||| Sbjct 1172 CTTTTCGTGGTCAACAAAGGAAACTG 1197 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408013129302767