Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaselia_20abdita_20[genbank_20GCA_5F001015175.1_202015-05-29] 121,379 sequences; 412,270,594 total letters Query= NC_018874.1 Length=211518 Score E Sequences producing significant alignments: (Bits) Value seq117008 113 6e-20 >seq117008 Length=14129 Score = 113 bits (124), Expect = 6e-20 Identities = 191/272 (70%), Gaps = 6/272 (2%) Strand=Plus/Plus Query 197014 TGATTAATCAGATCCTCGTCGCTAAAGCCCGTACCGATCTTACAAATGGATTCGTACATC 197073 ||||| ||| ||| || ||| |||| || ||||| |||||||| || || ||| | Sbjct 10780 TGATTCTTCAAATCTTCATCGGTAAATCCTGTACCAATCTTACAGATACTTTGGTATTCC 10839 Query 197074 TGGTTGTCGGGATTGTAACAGGCGAGTAAGAAAGC-GCCGTAGGTTCCCGTTCTCTTTCC 197132 | || || |||| |||||||| | |||||| | |||||| ||||| || | ||||| Sbjct 10840 TCATTTTCAGGATCATAACAGGCCAA-AAGAAACCCGCCGTAAGTTCCTGTGCGTTTTCC 10898 Query 197133 CACCCCGTTGAAGCCTCCGATAACCACCAGATCCA--GAGTGTCGCACACCCCTTCCATG 197190 |||| | || || || || |||| || | || | || |||||| ||||| Sbjct 10899 TTTCCCGCGATATCCACCTATGACTACCAAGTCTAATGAATCTCCTACACCCG--CCATG 10956 Query 197191 TAATCTTTCTTCAGTTTGAGCCAGCTTCTAGATCTCTTGGCAATCTCGTAGGTTGCGTTT 197250 || ||||| || ||||| ||||| |||||||||||||||| ||||| || || || | | Sbjct 10957 TAGTCTTTTTTAAGTTTAAGCCAATTTCTAGATCTCTTGGCTATCTCATATGTGGCTTCT 11016 Query 197251 ACGTCCAGGGTCTTGATCATCAATCCCTCGCA 197282 | || | || || | ||| | ||||| || Sbjct 11017 TCATCTAAAGTTTTAACCATAAGACCCTCACA 11048 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 675702840473520