Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Megaselia_20abdita_20[genbank_20GCA_5F001015175.1_202015-05-29]
121,379 sequences; 412,270,594 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq116385 118 2e-21
>seq116385
Length=1425
Score = 118 bits (130), Expect = 2e-21
Identities = 292/436 (67%), Gaps = 8/436 (2%)
Strand=Plus/Minus
Query 48127 CATGCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCA 48186
|||| ||||||||| | ||| | |||||||||| ||| || | |||||||||
Sbjct 590 CATGACGGCAAAGTCACAGTGGAGTCCTTCGTCCCTAGAGATAAGTTCATTGGAGAAGGT 531
Query 48187 GAGACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAA 48246
| ||||||||| | ||||||| || | |||||| || || |||||| || |||
Sbjct 530 CAAACCAGGCATCAAACCCCTCTTCTTCAACCAGAAGATCGCGGCGAAACTTCCGCTGAA 471
Query 48247 GAAGATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTC 48306
||| ||||| || || || || || || ||| ||||| | || | ||| || |
Sbjct 470 GAAAATGCCTTCAACGGCAGCAAAAGCAATGATTCTCTCGGCAAAGGTGGCGGATTTA-C 412
Query 48307 TGAGA-TCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGG 48365
|| | |||| || | |||||||| ||||||||||| | || || | |||| | |
Sbjct 411 TGCCAATCCAAGACAATGCCCAGTCAGCCTTCTTCTTCACACAAGGTAGATTCTCGACAG 352
Query 48366 CCCGGAAGAGCTTCTTGCACTCACCTGCG--TCCGCAACATAGGTAGT-GAGCAGCTTTG 48422
| |||||| | | || |||| | || | || | ||| || | |
Sbjct 351 CGTTGAAGAGGAAGT--CTCTTTCCTGTGGATCGCGGATGTAAG-AGTCGATTAAAATAC 295
Query 48423 CGTACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCT 48482
|||||| || ||||| || ||||| ||||| ||||||||||| ||||| | || |
Sbjct 294 TGTACATTTCCGAGTGGACGTTCTCCATAGCAATCTGGAACCCATAGAAACAGCGAGCTT 235
Query 48483 CAAACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTG 48542
|| | ||| ||||| || ||| | |||| || || |||||||| || ||||| |
Sbjct 234 CAGTAATCTGGACTTCCTGGGTGAAACGTTCCACCAAGTTTTCATTGACAATGCCATCGG 175
Query 48543 AAGCAGCAAAGAAGGC 48558
|||| || ||||| ||
Sbjct 174 AAGCGGCGAAGAAAGC 159
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 930119443503360
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |