Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaselia_20abdita_20[genbank_20GCA_5F001015175.1_202015-05-29] 121,379 sequences; 412,270,594 total letters Query= NC_019945.1 Length=132978 Score E Sequences producing significant alignments: (Bits) Value seq26001 105 6e-18 seq63354 87.8 2e-12 >seq26001 Length=10617 Score = 105 bits (116), Expect = 6e-18 Identities = 148/205 (72%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 28553 AATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTC 28612 ||||||||| || |||||||| | |||||||||||||||||| ||| |||||||| Sbjct 8561 AATGCAAATTTTCGTAAAAACCCTCACGGGTAAAACCATTACCCTAGAAGTAGAACCTTC 8620 Query 28613 AGAGACGGTGGCCGATCTCAA-GCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATC 28671 || || | | || | || || || | || |||||||||||| | || ||||| Sbjct 8621 GGATACTATCGAGAATGTTAAAGCCAAGATTCAA-GACAAAGAGGGAATTCCTCCAGATC 8679 Query 28672 AACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATA 28731 | || ||| | ||||| || ||||| ||| | ||||| ||| | ||||||| | Sbjct 8680 AGCAAAGATTGATCTTCGCTGGCAAGCAACTTGAAGACGGCCGTACTCTTTCCGATTACA 8739 Query 28732 ACATTCAAAAAGAATCTACTCTGCA 28756 | || |||||||| |||||||| || Sbjct 8740 ATATCCAAAAAGAGTCTACTCTTCA 8764 >seq63354 Length=4016 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 28553 AATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTC 28612 |||||| || || || || || | || ||||| ||||||||| ||| |||||||| Sbjct 1773 AATGCAGATCTTCGTCAAGACCCTTACTGGTAAGACCATTACCTTGGAAGTCGAACCTTC 1832 Query 28613 AGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672 || || | | || ||||| || ||| |||||||||||| | || |||||| Sbjct 1833 CGACACCATTGAAAATGTCAAGGCCAAGATCCAAGACAAAGAGGGAATCCCACCAGATCA 1892 Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 28732 ||| | | ||||| || || || ||||||||||| || || |||| || || Sbjct 1893 ACAACGTTTGATCTTCGCTGGAAAGCAATTGGAAGACGGACGCACCTTGTCCGACTACAA 1952 Query 28733 CATTCAAAAAGAATCTACTCTGCACATGGTATT 28765 ||| ||||| || || || || ||| |||| || Sbjct 1953 CATCCAAAAGGAGTCCACCCTTCACTTGGTGTT 1985 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424775495887641