Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaselia_20abdita_20[genbank_20GCA_5F001015175.1_202015-05-29] 121,379 sequences; 412,270,594 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq93051 145 4e-30 >seq93051 Length=3786 Score = 145 bits (160), Expect = 4e-30 Identities = 297/439 (68%), Gaps = 8/439 (2%) Strand=Plus/Minus Query 25933 CATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTT 25992 ||| |||||||| |||||||| | |||||||||| |||||| |||| | || ||||| Sbjct 1905 CATGAATAAATCGGGAATCCATAAAGCATAAAATAGATCTCTTGCTCGGAGCTCATCTTT 1846 Query 25993 TCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATA 26052 || ||| || || | ||||| || ||||||||||| || |||||||| |||||||| Sbjct 1845 ACCTGTATTTTTCTTCAAGTCTAAAAATTCAAAAATATCAGAATGCCATGGCTCTAAATA 1786 Query 26053 GATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATT 26112 ||||||||| || |||||| |||||| ||||| || ||| ||||| | ||| Sbjct 1785 AATAGCAAAAGCTCCGGGTCTTTTATTTCCACCCTGATCCACATATTTTGCAACGTTATT 1726 Query 26113 GAAAACTTTCAACATTGGAACTAATCCAGTTGAA----AATCCGTTTGTGCTATGAATCT 26168 ||| ||| | | ||| || ||||| || | ||| || ||| |||||| | | Sbjct 1725 GAACACTCTAAGCATAGGTACTAAACCGTTAGAAGTGCCATTAGTTCCTGCTAT-AGTAG 1667 Query 26169 TGGATCCTGTCGATCTAATATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAA 26228 || ||| | | | ||| || ||| ||||| ||||| ||||| | || |||| Sbjct 1666 TG---CCTTTAGCACGAATGCAATGCACATTTATACCAATTCCGCCAGCGGACTTAGAAA 1610 Query 26229 TAGCTGCACAATCTGAAACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTA 26288 | ||| || | | |||| | || ||||||| || ||| |||| || Sbjct 1609 TCATTGCGCATTGTTCGACTGATTTAAAGATTCCTTCAATTGAGTCAGAGCACATTGTTA 1550 Query 26289 ATAAAAAACAAGAAGATAATTGCGAATGAGTTGTTCCTGAATTAAATAATGTCGGTGTAG 26348 | | |||||| || |||| ||| | ||| ||| ||| || | || |||| || Sbjct 1549 AGAGAAAACAGGATGATAGTTGAGGGCGAGGTGTAGCTGCCGCGAACAGGGTAGGTGAAG 1490 Query 26349 CATGAGTATAATATCCTTC 26367 |||| || |||||| ||| Sbjct 1489 CATGGATAAAATATCTTTC 1471 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 252665676267425