Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaselia_20abdita_20[genbank_20GCA_5F001015175.1_202015-05-29] 121,379 sequences; 412,270,594 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq116385 96.9 4e-15 seq93051 93.3 5e-14 >seq116385 Length=1425 Score = 96.9 bits (106), Expect = 4e-15 Identities = 155/223 (70%), Gaps = 0/223 (0%) Strand=Plus/Plus Query 65009 TACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGGTTTGACACAAAGTCTCGCT 65068 |||| ||| | |||||||||| | |||||| || ||| ||| || || || | Sbjct 364 TACCTTGTGTGAAGAAGAAGGCTGACTGGGCATTGTCTTGGATTGGCAGTAAATCCGCCA 423 Query 65069 CCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCAT 65128 |||| |||||| | | |||| ||||| || || || || |||||| ||| | Sbjct 424 CCTTTGCCGAGAGAATCATTGCTTTTGCTGCCGTTGAAGGCATTTTCTTCAGCGGAAGTT 483 Query 65129 TCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATG 65188 || ||| || | |||||||||||| ||||| | ||||| || | |||||| |||| Sbjct 484 TCGCCGCGATCTTCTGGTTGAAGAAGAGGGGTTTGATGCCTGGTTTGACCTTCTCCAATG 543 Query 65189 AACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGCCGT 65231 ||||||| || | || || || |||||| || |||||||| Sbjct 544 AACTTATCTCTAGGGACGAAGGACTCCACTGTGACTTTGCCGT 586 >seq93051 Length=3786 Score = 93.3 bits (102), Expect = 5e-14 Identities = 247/375 (66%), Gaps = 2/375 (1%) Strand=Plus/Plus Query 75686 AGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGGT 75745 |||||||| |||| | | |||||||| || | |||||||| || || || | | | Sbjct 1864 AGAGATCTATTTTATGCTTTATGGATTCCCGATTTATTCATGAAACGCGTAGAAGCTGAT 1923 Query 75746 GGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTGAG 75805 | | ||||| | | ||||| | || ||||| || || | ||| ||| Sbjct 1924 GAGGATTGGTCATTGATGTGTCCCCATAAATGTCCAGGGCTACATGATGTTTGGGGAGAG 1983 Query 75806 GAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGTACCA 75865 |||||||| |||||| ||| || || ||||||| | ||| || | | | Sbjct 1984 GAGTTTGAGAATCTCTACGTAAAATACGAGAAGGAGGGAAAAGCTAACCGTAAAATTAAA 2043 Query 75866 GC-CGCCGATGTTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATAT 75924 || | | || | ||| || || || | ||||| || ||||| || ||||| || Sbjct 2044 GCTCAACAAT-TGTGGTTTGCCATAATCGAGTCACAAGTTGAAACTGGTACCCCATACAT 2102 Query 75925 GCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAG 75984 | | || || ||||||||||| | ||| ||||| ||| | || | || || || || | Sbjct 2103 GTTATATAAAGATGCTTGTAATAGGAAAAGTAATCAACAAAACGTAGGTACCATAAAATG 2162 Query 75985 CTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAA 76044 | ||||||||||| ||||| |||| || ||| | |||||| | || || ||||| Sbjct 2163 CAGCAATCTTTGCACAGAAATAGTAGAATATTCAGCTCCGGATGAAATCGCAGTCTGCAA 2222 Query 76045 TTTGGCATCAATCGC 76059 ||| ||||| || || Sbjct 2223 TTTAGCATCCATAGC 2237 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595664462231520