Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaselia_20abdita_20[genbank_20GCA_5F001015175.1_202015-05-29] 121,379 sequences; 412,270,594 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq44553 127 2e-23 >seq44553 Length=6885 Score = 127 bits (140), Expect = 2e-23 Identities = 144/193 (75%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 1592108 AAGCGCACCGACGACATCTCGCCGTGGGACAAGGAGTTTTGCGACGTCGAGCAGCCCACC 1592167 || ||||| ||||||||||| | ||||| || || | | || || ||| ||| Sbjct 3764 AAACGCACTGACGACATCTCTTCCTGGGATGCAGATTTCTTGAAAGTTGATCAGGGAACC 3823 Query 1592168 CTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGG 1592227 | |||||||||||||| || ||||| ||| | ||||| ||| | || | ||| | Sbjct 3824 TTGTTTGAGTTGATCCTTGCGGCCAATTACTTGGACATTAAGGGTTTGTTGGATGTCACC 3883 Query 1592228 TGCAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTT 1592287 ||||| | |||||||||||||||||||| ||| | || |||||||||||||| || || Sbjct 3884 TGCAAAACCGTGGCCAACATGATCAAGGGTAAGACTCCTGAGGAGATCCGCAAAACGTTC 3943 Query 1592288 AACATCAAGTACG 1592300 ||||||||| ||| Sbjct 3944 AACATCAAGAACG 3956 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6097178270842143