Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaselia_20abdita_20[genbank_20GCA_5F001015175.1_202015-05-29] 121,379 sequences; 412,270,594 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq93051 203 3e-47 seq63354 149 6e-31 seq26001 104 2e-17 seq30215 100 3e-16 >seq93051 Length=3786 Score = 203 bits (224), Expect = 3e-47 Identities = 554/842 (66%), Gaps = 6/842 (1%) Strand=Plus/Minus Query 138153 TTTATCTACAGTAAACTTTATGGCATCAGCGGCTGGTTTCGTTCTCAGATAATACATTCC 138212 |||||| |||||||||| || |||| ||| || || || || | || ||||||||| || Sbjct 3317 TTTATCAACAGTAAACTGAATAGCATTAGCTGCGGGCTTAGTACGCAAATAATACATACC 3258 Query 138213 CGTTTTTAACCCATTTTCCCAGGCGTACATGTGTATCGAAGTGAGTAACGCGTAAGTCGG 138272 ||||| | ||| || ||| || || | || || || ||||| | ||| | || Sbjct 3257 AGTTTTAAGCCCGAGTTTCCATGCATAAAAATGCATTGATGTGAGCTTTCCATAATTTGG 3198 Query 138273 TTTCGCCAGAAATATGTTAAACGATTGACTCTGATCGATGAAAGCGCCTCGATCAATGGC 138332 || ||| | | |||||||| || ||||| || || |||||||| || |||||| || Sbjct 3197 TTCCGCTACATGAATGTTAAATGACTGACTTTGGTCAATGAAAGCACCACGATCAGCAGC 3138 Query 138333 CATGTTAATTAAATTTTTACTTTTCATCTCCCACACGGTCTTGTATAGATCACGAATATG 138392 ||| | |||| | ||| | || ||||| || || ||||| || ||||| |||| Sbjct 3137 CATTTGAATTGATGCTTTGATAGAGATTTCCCAAACAGTTTTGTAAAGCTCACGTATATT 3078 Query 138393 TCGCGGTATTGTTGCAATATTTTGAAT-GCTCC-CGTTGGCCGCAATGATGCGATTTCTC 138450 | || ||| | | || | |||||| | || |||| | |||||| || || Sbjct 3077 TGCGGGAATTCTGTCTATTTCTTGAATAGAACCACGTTTA--GAAATGATTTCGTTCTTC 3020 Query 138451 ATGTCATCGTTGTACAGATTCAACTTGATCAAGTCGTTTA-TCAGATATCTGTTTATGAC 138509 || ||||| | | |||| | | |||| || || | | || || || | || Sbjct 3019 ATATCATCATCCCATAGATCTATTTCCGTCAAATCTTTCAATAAGTGATGA-TTAACCAC 2961 Query 138510 CTGAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGGCTCAAACGA 138569 ||| || || || | || |||| || ||||| || ||| | ||||| || || Sbjct 2960 CTGGAACTCTCCAGATAAGACTCTGCGGTTATAAATATTAGATGTGTATGGCTCGAAGGA 2901 Query 138570 TTCGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCACCAAAAGAGA 138629 ||| || || |||| ||| ||||| |||| ||| || ||||| || | || || || Sbjct 2900 TTCATTATTACCCAAAATTTGAGCTGTGGACGCTGTAGGCATTGGAGCAAGTAATAGGGA 2841 Query 138630 ATTCCGTAAACCGTGAAGCTTGATTCGTTCCTTGAGCGACGACCAGTCCCACAAATCGCT 138689 || | || || || | || || ||| || | | ||||||||| || ||| | Sbjct 2840 GTTTCTTACGCCATGCAATTTTATCTTTTCTTTCAATGCTTGCCAGTCCCATAAGTCGGT 2781 Query 138690 AGGTTTTTTGTTCCACATATCGTACTGTAACATTCCCAAACTTGCGGGACTGCCTTCGTA 138749 || |||| | ||||||||| ||||| | ||||| ||| | ||||| ||||| || Sbjct 2780 TGGAGTTTTATCCCACATATCATACTGGAGAATTCCTTTGCTTACTGGACTTCCTTCATA 2721 Query 138750 CGAATCGTATACACCAAACTCTTGCGCCAACTCGTTGCTCGCCTCGAGCGCACCATAGTA 138809 | || ||| ||| || || |||| || || || || || || |||||||| Sbjct 2720 TGTTTCATATGGTCCATCCTTTTCAGCCAGTTCACAACTAGCTTCAAGAGCTCCATAGTA 2661 Query 138810 AATAGTTTCGGCAATCTGCTGATTGAGCAATCGGGCCTCGGCGCTCTCGTACGGCATGCG 138869 ||| ||||| ||| || || || | |||| | || || ||| || || || | || Sbjct 2660 AATTGTTTCAAAAATTTGTTGGTTCAACAATTGAGCTTCTTTGCTTTCATAAGGAAAACG 2601 Query 138870 GAGCATCGTGAACGCGTCGGCCAGCCCTTGCACGCCCACTCCGACAGGGCGATGGCGCAG 138929 | || | || || || | | ||||| || || | || | ||| | ||| |||| Sbjct 2600 CATAATAATCAAAGCATCAGAAAATCCTTGAACACCAATACCTATAGGTCTATGTCGCAA 2541 Query 138930 ATTTGACGCTTTTGCGGCTTCGATAGGATAATAGTTTACATCGATGATTTTGTTTAAATT 138989 ||| || || || || | |||||||| |||||||| ||||||||||| ||||| Sbjct 2540 ATTCGATTTCTTAGCTTCTGGCAATGGATAATAATTTACATCAATGATTTTGTTCAAATT 2481 Query 138990 TC 138991 || Sbjct 2480 TC 2479 Score = 111 bits (122), Expect = 1e-19 Identities = 243/361 (67%), Gaps = 10/361 (3%) Strand=Plus/Minus Query 139081 ATCGAGGCTATGTTGCACACCGCCACTTCGTCGGGGTCGCTG--TATTCGACAATTTCGG 139138 || || |||| ||||| || || | ||| || || |||| ||||| || ||||| | Sbjct 2234 ATGGATGCTAAATTGCAGACTGCGATTTCATCCGGA--GCTGAATATTCTACTATTTCTG 2177 Query 139139 CACACAAATTACTACACTTGATCGTACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAG 139198 || | ||| || || || || ||||||| ||||||||||| ||||| | ||||||| Sbjct 2176 TGCAAAGATTGCTGCATTTTATGGTACCTACGTTTTGTTGATTACTTTTCCTATTACAAG 2117 Query 139199 CATCTTTGTAAAGCATATACGGTGTGCCAGTTTCCACTTGTGTCTCTATAATGAATTTGA 139258 ||||||| || | ||| || || || |||||||| ||||||| ||| || ||| Sbjct 2116 CATCTTTATATAACATGTATGGGGTACCAGTTTCAACTTGTGACTCGATTATGGCAAACC 2057 Query 139259 ACAAGTCCCTAGCTTGTATTTGACGCACGTAAAGTT---CGTCGCGCTCGTACTTTTCGT 139315 |||| | ||||| |||| ||| || | || | || |||||| ||| ||| Sbjct 2056 ACAATTGTTGAGCTTTAATTTTACG---GTTAGCTTTTCCCTCCTTCTCGTATTTTACGT 2000 Query 139316 AGAGTTCGTCGAATCGTTCACCGTAGGCGTCAGAAAGATCGCGACACTTGTCAGGACACA 139375 |||| | || || || || | | ||| || | |||| || | ||||||| Sbjct 1999 AGAGATTCTCAAACTCCTCTCCCCAAACATCATGTAGCCCTGGACATTTATGGGGACACA 1940 Query 139376 TGAGCGACCATACGCCGTTCGCCTTGACGCGCCTCATGAACAGATCCGGAATCCACAAAG 139435 | | ||||| | | | || | ||||| ||||||| | ||| |||||||| |||| Sbjct 1939 TCAATGACCAATCCTCATCAGCTTCTACGCGTTTCATGAATAAATCGGGAATCCATAAAG 1880 Query 139436 C 139436 | Sbjct 1879 C 1879 >seq63354 Length=4016 Score = 149 bits (164), Expect = 6e-31 Identities = 162/215 (75%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || || ||||| || ||||| | ||||| ||| | || Sbjct 1774 ATGCAGATCTTCGTCAAGACCCTTACTGGTAAGACCATTACCTTGGAAGTCGAACCTTCC 1833 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | |||| || || ||||||||||||||||| ||||| || || |||||| Sbjct 1834 GACACCATTGAAAATGTCAAGGCCAAGATCCAAGACAAAGAGGGAATCCCACCAGATCAA 1893 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 |||||||||||||| || || || || |||| || | | | |||| || || ||| Sbjct 1894 CAACGTTTGATCTTCGCTGGAAAGCAATTGGAAGACGGACGCACCTTGTCCGACTACAAC 1953 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918 || |||||||| || || || |||||||||||||| Sbjct 1954 ATCCAAAAGGAGTCCACCCTTCACTTGGTGTTGCG 1988 >seq26001 Length=10617 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || || | ||||| || || |||||||| ||||| || ||||||||| | | Sbjct 8562 ATGCAAATTTTCGTAAAAACCCTCACGGGTAAAACCATTACCCTAGAAGTAGAACCTTCG 8621 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || ||| ||||| ||||||||||| ||||| ||||| ||||| Sbjct 8622 GATACTATCGAGAATGTTAAAGCCAAGATTCAAGACAAAGAGGGAATTCCTCCAGATCAG 8681 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||| | |||||||| || || || || || || || | | | || ||||| || Sbjct 8682 CAAAGATTGATCTTCGCTGGCAAGCAACTTGAAGACGGCCGTACTCTTTCCGATTACAAT 8741 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTG 24913 || ||||| || || || || || || ||| Sbjct 8742 ATCCAAAAAGAGTCTACTCTTCATTTAGTG 8771 >seq30215 Length=1837 Score = 100 bits (110), Expect = 3e-16 Identities = 151/212 (71%), Gaps = 6/212 (3%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || | || || | || ||||| || ||||| | || || || | || Sbjct 1521 ATGCAGATTTTCGTCAAGACTTTGACTGGTAAGACAATTACCTTGGAGGTTGAGCCTTCC 1580 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || || || || |||||||||||||| || ||||| || ||| Sbjct 1581 GATACCATCGAGAATGTCAAGGCTAAAATTCAAGACAAAGAAGGTATTCCTCCAGACCAA 1640 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGA--TTCGAGAAACA-TGTCAGATTAT 24880 || ||||||||||| || || || || |||| || ||| ||| |||||||||| Sbjct 1641 CAGCGTTTGATCTTCGCTGGAAAGCAATTGGAAGACGGTCG---TACATTGTCAGATTAC 1697 Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGT 24912 || ||||||||||| || || || || ||||| Sbjct 1698 AATATTCAAAAGGAGTCCACTCTTCATTTGGT 1729 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449214998490120