Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaselia_20abdita_20[genbank_20GCA_5F001015175.1_202015-05-29] 121,379 sequences; 412,270,594 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq63354 116 2e-21 seq30215 84.2 1e-11 >seq63354 Length=4016 Score = 116 bits (128), Expect = 2e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 34769 ACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCC 34828 |||| ||||| |||| |||||| || ||||| ||||| || | | |||| | || ||| Sbjct 1982 ACCAAGTGAAGGGTGGACTCCTTTTGGATGTTGTAGTCGGACAAGGTGCGTCCGTCTTCC 1923 Query 34829 AGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTT 34888 | ||||||||| |||||||||| ||||| || ||| | || | ||||| ||||| | Sbjct 1922 AATTGCTTTCCAGCGAAGATCAAACGTTGTTGATCTGGTGGGATTCCCTCTTTGTCTTGG 1863 Query 34889 ATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTT 34948 || || ||||| | | || | || | ||||| || | ||| |||||||| Sbjct 1862 ATCTTGGCCTTGACATTTTCAATGGTGTCGGAAGGTTCGACTTCCAAGGTAATGGTCTTA 1803 Query 34949 CCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || |||||||| || ||||||||||| Sbjct 1802 CCAGTAAGGGTCTTGACGAAGATCTGCAT 1774 >seq30215 Length=1837 Score = 84.2 bits (92), Expect = 1e-11 Identities = 150/217 (69%), Gaps = 4/217 (2%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||||| |||| ||| |||||| ||||| || || || || | | || | || Sbjct 1732 AGGACCAAATGAAGAGTGGACTCCTTTTGAATATTGTAATCTGACAATGTACGACCGTCT 1673 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 |||| ||||||||| |||||||||| || || |||||| | || | || || ||||| Sbjct 1672 TCCAATTGCTTTCCAGCGAAGATCAAACGCTGTTGGTCTGGAGGAATACCTTCTTTGTCT 1613 Query 34886 TTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGG 34943 | ||||| ||||| || || || | || | ||| || || | ||| || | Sbjct 1612 TGAATTTTAGCCTTGAC--ATTCTCGATGGTATCGGAAGGCTCAACCTCCAAGGTAATTG 1555 Query 34944 TCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATGAT 34980 |||| || || | ||||| || || ||||||||||| Sbjct 1554 TCTTACCAGTCAAAGTCTTGACGAAAATCTGCATGAT 1518 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325211000503601