Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaselia_20abdita_20[genbank_20GCA_5F001015175.1_202015-05-29] 121,379 sequences; 412,270,594 total letters Query= NC_024486.1 Length=43734 Score E Sequences producing significant alignments: (Bits) Value seq17584 104 7e-18 >seq17584 Length=4186 Score = 104 bits (114), Expect = 7e-18 Identities = 125/170 (74%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 1377 TACGGCAGAATAGCTCCAAGATCCGGTCTAGCGGCAAAGTATTCAATTGATGTGGGCGCT 1436 || || ||| | ||||||||||| || || || | |||| | | || ||||| |||||| Sbjct 2281 TATGGTAGAGTGGCTCCAAGATCTGGCCTGGCTGTAAAGAACTTCATCGATGTTGGCGCT 2222 Query 1437 GGAGTTATTGACCCTGATTATCGTGGAAGTATCAGTGTTGTTTTATTTAATCATTCGGAT 1496 ||||| || ||| ||||| || |||| | || | || ||||| || || ||||| ||| Sbjct 2221 GGAGTCATCGACGAAGATTACCGGGGAAATCTCGGCGTCGTTTTGTTCAACCATTCCGAT 2162 Query 1497 GTGCCTTTCCATGTGTCGAGGGGAGACAGAATAGCTCAGTTAATTTGTGA 1546 | ||| |||| || |||||||||||| ||||| |||| ||||| Sbjct 2161 CAGGACTTCGATGTCAAGAAGGGAGACAGAATCGCTCAACTAATCTGTGA 2112 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 139625656482208