Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaselia_20abdita_20[genbank_20GCA_5F001015175.1_202015-05-29] 121,379 sequences; 412,270,594 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq30215 100 3e-16 seq93051 91.5 1e-13 seq26001 86.0 6e-12 >seq30215 Length=1837 Score = 100 bits (110), Expect = 3e-16 Identities = 151/210 (72%), Gaps = 6/210 (3%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGA 133512 ||||| | |||||||| || || ||||||||||| || || |||| ||| || | Sbjct 1726 AAATGAAGAGTGGACTCCTTTTGAATATTGTAATCTGACAATGT--ACGACCGTCTTCCA 1669 Query 133513 GCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGA 133572 ||||| || ||| | || | ||||| ||||| ||||| || ||||| ||||| ||| Sbjct 1668 ATTGCTTTCCAGCGAAGATCAAACGCTGTTGGTCTGGAGGAATACCTTCTTTGTCT-TGA 1610 Query 133573 TCTTTTGC-TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTG 133631 ||| || |||| | ||| | || |||| ||||| || || | ||| | || || Sbjct 1609 ATTTTAGCCTTGACATTCTCGATGGTATCGGAAGGCTCAACCTCCAAGGTAATTGTCTTA 1550 Query 133632 CCGGTCAGAGTTTTTACGAAAATCTGCATG 133661 || |||| ||| || ||||||||||||||| Sbjct 1549 CCAGTCAAAGTCTTGACGAAAATCTGCATG 1520 >seq93051 Length=3786 Score = 91.5 bits (100), Expect = 1e-13 Identities = 131/185 (71%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 148810 ATCGGTTCACGGCGATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACT 148869 || |||||| || || || |||| |||||| || || | |||||||| || || | Sbjct 2248 ATTGGTTCAATGCTATGGATGCTAAATTGCAGACTGCGATTTCATCCGGAGCTGAATATT 2189 Query 148870 CTACGATCTCGGCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCT 148929 |||| || || | ||| |||||||||||||| || || ||||| | |||||| || | Sbjct 2188 CTACTATTTCTGTGCAAAGATTGCTGCATTTTATGGTACCTACGTTTTGTTGATTACTTT 2129 Query 148930 TGCTGTTGCACGCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCA 148989 | || || || || || || || | |||||| || |||||||| || || | || | Sbjct 2128 TCCTATTACAAGCATCTTTATATAACATGTATGGGGTACCAGTTTCAACTTGTGACTCGA 2069 Query 148990 CTATG 148994 |||| Sbjct 2068 TTATG 2064 >seq26001 Length=10617 Score = 86.0 bits (94), Expect = 6e-12 Identities = 147/209 (70%), Gaps = 6/209 (3%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGA 133512 ||||| | || |||||||| || |||||||||||| | || ||| ||| || | Sbjct 8767 AAATGAAGAGTAGACTCTTTTTGGATATTGTAATCGGAAAGAGT--ACGGCCGTCTTCAA 8710 Query 133513 GCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGA 133572 | |||||||| ||| | || | | ||||| || ||||| || || || ||||| | Sbjct 8709 GTTGCTTGCCAGCGAAGATCAATCTTTGCTGATCTGGAGGAATTCCCTCTTTGTCTTGAA 8650 Query 133573 TCTTTTGCTTGAGC-TGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTG 133631 |||| |||| | | | ||| | || || | || || || || | ||| | |||||| Sbjct 8649 TCTTG-GCTTTAACATTCTCGATAGTATCCGAAGGTTCTACTTCTAGGGTAATGGTTTTA 8591 Query 133632 CCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 || || || |||||||||||||| ||||| Sbjct 8590 CCCGTGAGGGTTTTTACGAAAATTTGCAT 8562 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482687335833960