Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaselia_20abdita_20[genbank_20GCA_5F001015175.1_202015-05-29] 121,379 sequences; 412,270,594 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq30215 102 8e-17 seq63354 86.0 6e-12 seq93051 84.2 2e-11 >seq30215 Length=1837 Score = 102 bits (112), Expect = 8e-17 Identities = 149/211 (71%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974 |||||||| | | ||||| |||||||| ||||| || || ||||| ||||| Sbjct 1729 ACCAAATGAAGAGTGGACTCCTTTTGAATATTGTAATCTGACAATGTACGACCGTCTTCC 1670 Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTA 132034 | || || || | |||| | ||||||||| |||||||| || |||||||| || | Sbjct 1669 AATTGCTTTCCAGCGAAGATCAAACGCTGTTGGTCTGGAGGAATACCTTCTTTGTCTTGA 1610 Query 132035 ATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTA 132094 ||||| || | | || | ||||||| ||||| || || | || | || ||| Sbjct 1609 ATTTTAGCCTTGACATTCTCGATGGTATCGGAAGGCTCAACCTCCAAGGTAATTGTCTTA 1550 Query 132095 CCAGTCAGAGTTTTTATGAAAATCTGCATGA 132125 ||||||| ||| || | |||||||||||||| Sbjct 1549 CCAGTCAAAGTCTTGACGAAAATCTGCATGA 1519 >seq63354 Length=4016 Score = 86.0 bits (94), Expect = 6e-12 Identities = 148/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968 ||||| ||||| || | | | ||||| ||||| |||||||||||| || ||| || Sbjct 1988 CGCAACACCAAGTGAAGGGTGGACTCCTTTTGGATGTTGTAGTCGGACAAGGTGCGTCCG 1929 Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028 ||||| | || || || | |||| | ||| ||||||||||| || || || ||||| Sbjct 1928 TCTTCCAATTGCTTTCCAGCGAAGATCAAACGTTGTTGATCTGGTGGGATTCCCTCTTTG 1869 Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088 || || || || | | ||| | || |||| || || ||||| | || | Sbjct 1868 TCTTGGATCTTGGCCTTGACATTTTCAATGGTGTCGGAAGGTTCGACTTCCAAGGTAATG 1809 Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || |||||||| || || || | ||| |||||||| Sbjct 1808 GTCTTACCAGTAAGGGTCTTGACGAAGATCTGCAT 1774 >seq93051 Length=3786 Score = 84.2 bits (92), Expect = 2e-11 Identities = 124/174 (71%), Gaps = 4/174 (2%) Strand=Plus/Minus Query 147449 ATTGGTTCACGGCGATAGACGCCAGATTGCAGACGGCCGTCTCTTCGGCGTCGCTG--TA 147506 ||||||||| || || || || | ||||||||| || | || || || |||| || Sbjct 2248 ATTGGTTCAATGCTATGGATGCTAAATTGCAGACTGCGATTTCATC--CGGAGCTGAATA 2191 Query 147507 CTGCACGATTTCGGCGCACAGGTTGCTGCATTTTATGACTCCCAAATTTTGCTGATTGCT 147566 | || ||||| | ||| || ||||||||||||||| || | ||||| ||||| || Sbjct 2190 TTCTACTATTTCTGTGCAAAGATTGCTGCATTTTATGGTACCTACGTTTTGTTGATTACT 2131 Query 147567 TTTCCGATTGCACGCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTG 147620 ||||| ||| || || ||||| | | |||||| || || || || ||||| Sbjct 2130 TTTCCTATTACAAGCATCTTTATATAACATGTATGGGGTACCAGTTTCAACTTG 2077 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475888067614440