Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaselia_20abdita_20[genbank_20GCA_5F001015175.1_202015-05-29] 121,379 sequences; 412,270,594 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq116385 104 3e-16 >seq116385 Length=1425 Score = 104 bits (114), Expect = 3e-16 Identities = 337/517 (65%), Gaps = 5/517 (1%) Strand=Plus/Plus Query 1455796 AGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACCTCGGCGCCGACACGGTCCACT 1455855 |||| ||||| || || ||||| | ||||||||||| || | ||| | | ||| Sbjct 52 AGGCGGAGGCTTCGTTCTGGACTGTGGAGGAGGTCGATCTATCCAAGGACCAAGCCGACT 111 Query 1455856 GGGTGTCGCTGAGCGACGACGAGCGCCATTTCATCAAGCACGTCCTCGCCTTTTTTCGCC 1455915 ||| | | ||| || ||| || ||||| ||||| | || ||| |||||| Sbjct 112 GGGAGAAGTTGAATTCCGGAGAGAAGCACTTCATTTCCCACGTTTTGGC-TTTCTTCGCC 170 Query 1455916 GCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGCCGCTTTATGAAAGAGGTCCAATTG 1455975 || ||||||||| || || ||| ||| | || || | | || ||||| | Sbjct 171 GCTTCCGATGGCATTGTCAATGAAAACTTGGTGGAACGTTTCACCCAGGAAGTCCAGATT 230 Query 1455976 CCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCCATCGAAAACATCCACTCTGAAACC 1456035 | || || || | || || ||||||||||| || || || ||| ||||||| |||| Sbjct 231 ACTGAAGCTCGCTGTTTCTATGGGTTCCAGATTGCTATGGAGAACGTCCACTCGGAAATG 290 Query 1456036 TACTCGCTCCTGATCGACACCTACGTCAAGGACCCGGTCGAGAAGGACCACCTCTTTCGC 1456095 ||| | | |||||| | ||| || || || || | ||| |||||| | Sbjct 291 TACAGTATTTTAATCGACTCTTACATCCGCGATCCACAGGAAAGAGACTTCCTCTTCAAC 350 Query 1456096 GCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGCCGACTGGGCGATGAAGTGGATCAAC 1456155 || |||| | | || | |||| ||| ||||| |||||||| || ||||| | Sbjct 351 GCTGTCGAGAATCTACCTTGTGTGAAGAAGAAGGCTGACTGGGCATTGTCTTGGATTGGC 410 Query 1456156 AAGGAGGGCCTCGACACTTTGCCGAGCGGCTCGTCGGCTTTGCCG-CGTCGAGGGCATCT 1456214 || | || | || |||||||||| | || | | ||||| | ||| || ||||| | Sbjct 411 -AGTAAATCCGCCAC-CTTTGCCGAGAGAATCATTGCTTTTGCTGCCGTTGAAGGCATTT 468 Query 1456215 TTTTCTCGGGCAGTTTCTGCGCCATCTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTC 1456274 | ||| || |||||| ||| ||||| ||| | |||||| | || | ||||| ||| Sbjct 469 TCTTCAGCGGAAGTTTCGCCGCGATCTTCTGGTTGAAGAAGAGGGGTTTGATGCCTGGT- 527 Query 1456275 TTCTGCTTTAGCAACGAATTTATCAGTCGCGACGAAG 1456311 || ||| ||| ||| ||||| | | ||||||| Sbjct 528 TTGACCTTCTCCAATGAACTTATCTCTAGGGACGAAG 564 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7166103972355398