Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaselia_20abdita_20[genbank_20GCA_5F001015175.1_202015-05-29] 121,379 sequences; 412,270,594 total letters Query= NC_027916.2 Length=160358 Score E Sequences producing significant alignments: (Bits) Value seq82395 96.9 4e-15 >seq82395 Length=2084 Score = 96.9 bits (106), Expect = 4e-15 Identities = 213/311 (68%), Gaps = 10/311 (3%) Strand=Plus/Plus Query 31252 GCATAACTCGCTATGTTGAATGGTACACCCAATCCCAA-ATCGGCAGATCGTTGATATAA 31310 |||||||| || || ||||| || || || || ||||| ||||||||||| || || | Sbjct 713 GCATAACTGGCAATATTGAACGGAACTCC-AAGCCCAACATCGGCAGATCTCTGGTACAT 771 Query 31311 CAAACAGGAAAGTTCATCTCCGGTCACGTAAAATTGAAATAACACATGACAAGGCGGCAA 31370 |||||| || ||||| || || ||||| || ||| || ||||||||| ||||| Sbjct 772 CAAACATGAGAGTTCGTCCCCTTGAACGTAGAACTGAGCGAAACAATGACAAGGAGGCAA 831 Query 31371 AGCCATTTCACAGGTATCGACGGGATTCCAAGCGCTTACTAACAAACGCCGACTG---GT 31427 |||||||| | || ||||||||||| || || ||||| ||| ||| || Sbjct 832 AGCCATTTTGGGGAGGTCCACGGGATTCCA--GGCAGACATACAAA-TCCGTCTGTCCGT 888 Query 31428 TGGATCACGCTT-AATCTCTTCTATCACGGCTGTTATTTGATCGATTCCTTCACCCGTAT 31486 || | | ||| | |||| | || ||| | | | ||| || | |||| |||| Sbjct 889 AGGGTTATTCTTGATTCTC-TGAATGACGTCATTCAGTTGGTCTACGCCTTTGTTGGTAT 947 Query 31487 AATTACTATCACATCCCTTGTAGGCTGCACCGAAATGTCGCCATTGAAACCCATAAATAG 31546 | | | | ||| || || |||| |||||||| |||||||| || || || | | Sbjct 948 AGTCATCGTGACAGGTTTTATACTCTGCTCCGAAATGACGCCATTGGAATCCGTAGACCG 1007 Query 31547 GTCCCAGGTCA 31557 ||||||||||| Sbjct 1008 GTCCCAGGTCA 1018 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 512239230459120