Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaselia_20abdita_20[genbank_20GCA_5F001015175.1_202015-05-29] 121,379 sequences; 412,270,594 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq116385 86.0 2e-11 >seq116385 Length=1425 Score = 86.0 bits (94), Expect = 2e-11 Identities = 118/164 (72%), Gaps = 1/164 (1%) Strand=Plus/Plus Query 443696 CAGCTTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAG 443755 || ||| | |||| || | | |||||||||| || ||||| | || || ||||| || Sbjct 422 CACCTTTGCCGAGAGAATCATTGCTTTTGCTGCCGTTGAAGGCATTTTCTTCAGCGGAAG 481 Query 443756 CTTTAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTA 443815 ||| ||| | |||||||||||||| ||| | || | |||| ||| ||||||| | Sbjct 482 -TTTCGCCGCGATCTTCTGGTTGAAGAAGAGGGGTTTGATGCCTGGTTTGACCTTCTCCA 540 Query 443816 ACGAACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCC 443859 | ||||| ||| | ||||||| || | || || ||||| ||| Sbjct 541 ATGAACTTATCTCTAGGGACGAAGGACTCCACTGTGACTTTGCC 584 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1585865869984655