Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaselia_20abdita_20[genbank_20GCA_5F001015175.1_202015-05-29] 121,379 sequences; 412,270,594 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq116385 100 4e-16 >seq116385 Length=1425 Score = 100 bits (110), Expect = 4e-16 Identities = 340/523 (65%), Gaps = 10/523 (2%) Strand=Plus/Minus Query 130013 ACGGCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGA 130072 |||||||| || |||||| || ||||| | ||||| |||||||| |||||| || | Sbjct 586 ACGGCAAAGTCACAGTGGAGTCCTTCGTCCCTAGAGATAAGTTCATTGGAGAAGGTCAAA 527 Query 130073 CCTGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAG 130132 || ||||| | ||||| ||||||||||||||| ||||| || || |||||| Sbjct 526 CCAGGCATCAAACCCCTCTTCTTCAACCAGAAGATCGCGGCGAAACTTCCGCTGAAGAAA 467 Query 130133 ATCCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGTATCA 130192 || || || || || || |||| || | ||| ||||||| | ||| || | || Sbjct 466 ATGCCTTCAACGGCAGCAAAAGCAATGATTCTCTCGGCAAAGGTGGCGGATTTACTGCCA 407 Query 130193 AACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCA 130252 | ||| || ||||| | ||||| |||| | ||| || | ||| || || | Sbjct 406 ATCCAAGACAATGCCCAGTCAGCCTTCTTCTTCACACAAGGTAGATTCTCGACAGCGTTG 347 Query 130253 AAGAGTTCCT-TCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGT 130311 ||||| | ||||| ||| |||||| |||||| || || | | || | Sbjct 346 AAGAGGAAGTCTCTTTCCTG-TGGATCGCGGATGTAAGAGTCGATTAAAATACTGTACAT 288 Query 130312 TTCGCCATGGACCATTTCATTATGGCA--CTGATACGCGTAGAAAGAGCGCGCTTCGCTT 130369 ||| ||||| ||| || ||| ||| || | |||||| |||| ||||| | Sbjct 287 TTCCGAGTGGAC--GTTCTCCATAGCAATCTGGAACCCATAGAAACAGCGAGCTTCAGTA 230 Query 130370 ATCTGTACCTCATCTGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCA 130429 ||||| || || | | ||| | | || ||| ||||| |||||||| | Sbjct 229 ATCTGGACTTCCTGGGTGAAACGTTCCACCAAGTTTTCATTGACAATGCCATCGGAAGCG 170 Query 130430 GCAAAAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCG--TTCAGGGTCTTCC 130487 || || || |||| | | ||||| | | ||| || | |||| ||| || Sbjct 169 GCGAAGAAAGCCAAAACGTGGGAAATGAAGTGC--TTCTCTCCGGAATTCAACTTCTCCC 112 Query 130488 AGTCGTCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 130530 ||||| | | ||||| || ||||| ||||||||| ||||||| Sbjct 111 AGTCGGCTTGGTCCTTGGATAGATCGACCTCCTCCACAGTCCA 69 Score = 91.5 bits (100), Expect = 2e-13 Identities = 79/98 (81%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 130013 ACGGCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGA 130072 |||||||| || |||||| || ||||| | ||||| |||||||| |||||| || | Sbjct 753 ACGGCAAAGTCACAGTGGAGTCCTTCGTCCCTAGAGATAAGTTCATTGGAGAAGGTCAAA 694 Query 130073 CCTGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGC 130110 || ||||| | ||||| ||||||||||||||| ||||| Sbjct 693 CCAGGCATCAAACCCCTCTTCTTCAACCAGAAGATCGC 656 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 617496886923240