Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaselia_20abdita_20[genbank_20GCA_5F001015175.1_202015-05-29] 121,379 sequences; 412,270,594 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq24307 102 9e-17 >seq24307 Length=12971 Score = 102 bits (112), Expect = 9e-17 Identities = 167/237 (70%), Gaps = 8/237 (3%) Strand=Plus/Plus Query 7397 GGAATCCTCTTCAACCATGAATCACCGAGACGAGGTGCAGACTTTGTCACAAAGAAGATT 7456 |||||||| |||||||| ||||| || ||| |||| | | ||||||| |||| ||| || Sbjct 4299 GGAATCCTTTTCAACCACGAATCTCCTAGAAGAGGAGAAAACTTTGTTACAAGGAAAATC 4358 Query 7457 ACCGAGG---GTATCAAACAAATCATGAAGGGTGAAAAGGAGTTCATTGAATTGGGTAAC 7513 || ||| || | || | ||| | | || || ||||| | | ||| |||| || Sbjct 4359 ACA-AGGTCTGTGGCTAAAATATCTTTA--GGACAATTGGAGTGCTTCGAACTGGGCAAT 4415 Query 7514 ATAAACGCGGCGAGAGATTGGGGTCACGCGAAGGACTATGTTGAAGCTATGTGGCTCATG 7573 | || | ||||||||||| ||||| || ||||| ||||| ||||||||| | ||| Sbjct 4416 CTCGACTCCAAAAGAGATTGGGGACACGCCAAAGACTACGTTGAGGCTATGTGGATGATG 4475 Query 7574 CTTCAACAAGAGGAAGCCGACGAATATGTAGTAGCAACGGGTGAGACCCATACAGTG 7630 || ||| || || || || | ||| |||| || || ||||||| |||||| Sbjct 4476 CTGCAATGTGATAAACCCAGTGATTTTGTTATAGCTACTGGAGAGACCC--ACAGTG 4530 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 582375854841960