Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaselia_20abdita_20[genbank_20GCA_5F001015175.1_202015-05-29] 121,379 sequences; 412,270,594 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq82395 174 1e-38 >seq82395 Length=2084 Score = 174 bits (192), Expect = 1e-38 Identities = 485/741 (65%), Gaps = 10/741 (1%) Strand=Plus/Plus Query 29727 ATCAGACTGCCATCCTCATCCTTATGGCGGGATGAGGGTCGTAACCCTCCAGGGAGAAAT 29786 |||| || ||||| ||| | |||| || | || || || || || | | ||||| Sbjct 462 ATCAAACAGCCATTTCCATTTTAATGGTTGGGTATGGATCATATCCTTCGATAGTGAAAT 521 Query 29787 CCTCTGCCTTAAAGTCGTCCAGGCTCTCCACCCTCCTGTTTATCCTCAGTGTGGGAAAGG 29846 | || || ||||| || | | || || | | |||||| |||| | || || | Sbjct 522 CTTCGAATTTGAAGTCCTCGATTTTTTCAACTTTACGGTTTATGACCAGTTTAGGGAATG 581 Query 29847 GTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTTATCCAGGTAGACGTGAG 29906 |||| || | |||| ||||| |||| |||||||| | || | ||| ||||||| Sbjct 582 GTCTTGGAACTCTCTTCAGCTGTTCTTTCAAAGGTTCCACATGATTCTTGTAAACGTGAG 641 Query 29907 CGTCTCCCAGGTTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGT 29966 |||||| | ||| ||||| || ||| | ||| ||| || || || ||||||| Sbjct 642 TGTCTCCGAAAGAGTGAACAAAGTCGCCCACCTTTAGTCCGCAAACATGGGCAATCATGT 701 Query 29967 ACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACC 30026 | || | | | || ||||| || || || || || || ||||| | || | || | Sbjct 702 AGGTCAACAATGCATAACTGGCAATATTGAACGGAACTCCAAGCCCAACATCGGCAGATC 761 Query 30027 TCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCTCACGTAAAACTGACACATGGCGTGGC 30086 ||||||| | | ||| ||||| || | | ||||| |||||| | || | Sbjct 762 TCTGGTACATCAAACATGAGAGTTCGTCCCCTTGAACGTAGAACTGAGCGAAACAATGAC 821 Query 30087 ACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGATGATGCGCC 30146 | ||||| | |||||| | | ||| ||| |||||||| ||| || || | Sbjct 822 AAGGAGGCAAAGCCATTTTGGGGAGGTCCACGGGATTCCAGGCAGACATACAAATCCGTC 881 Query 30147 TGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTTTTGCAGCTGATCCACCCCCATCC 30206 |||| ||||| ||| |||| | | | ||| | ||| || || || || | Sbjct 882 TGTCCGTAGGGTTATTCTTGATTCTCTGAATGACGTCATTCAGTTGGTCTACGCCTTTGT 941 Query 30207 CCGAGTAGTCTGCCCTCATGTCCG----TGTACTCTGCTCCGAAATGCCTCCACTGGAAC 30262 | ||||| || || | | | ||||||||||||||||| | ||| ||||| Sbjct 942 TGGTATAGTCA----TCGTGACAGGTTTTATACTCTGCTCCGAAATGACGCCATTGGAAT 997 Query 30263 CCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAG 30322 ||||| |||||||||||||| |||||||| |||| ||| || | |||||||||||| Sbjct 998 CCGTAGACCGGTCCCAGGTCACCCTCTTCTCTGTCGGTGAATCCACACTTGTCCAAAAAC 1057 Query 30323 TCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTC-AGAGAGCTCTTTGGAGTT 30381 ||||||| || ||| ||||||| || | || |||||| | || || |||| || Sbjct 1058 TCTCTGGTACTATTGCCGTCCCAAATTCTCACATTCTTCTCTTGCAAGATC-TTGGCATT 1116 Query 30382 TGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAAAAGACCCTCTT 30441 || ||| | | ||||||| ||||||||| |||| | |||| || || || || Sbjct 1117 GGTCTGACCTTTTATAAACCACAAAAGCTCCTCCGCGACTCCTCTCCAGAAAACTCTTTT 1176 Query 30442 GGTCGTGAGGAGGGGAAACTG 30462 || || | | |||||||| Sbjct 1177 CGTGGTCAACAAAGGAAACTG 1197 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405709342358868