Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Megaselia_20abdita_20[genbank_20GCA_5F001015175.1_202015-05-29]
121,379 sequences; 412,270,594 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq30215 113 3e-20
seq63354 107 1e-18
seq26001 98.7 6e-16
>seq30215
Length=1837
Score = 113 bits (124), Expect = 3e-20
Identities = 155/214 (72%), Gaps = 2/214 (1%)
Strand=Plus/Minus
Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557
|||||||| |||||| |||||||||||| || |||||||| | ||| || |||||||
Sbjct 1729 ACCAAATGAAGAGTGGACTCCTTTTGAATATTGTAATCTGACAATGTACGACCGTCTTCC 1670
Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617
| ||| || || || || || |||||||||||||| || || | || || |||||| ||
Sbjct 1669 AATTGCTTTCCAGCGAAGATCAAACGCTGTTGGTCTGGAGGAATACCTTCTTTGTCT-TG 1611
Query 34618 ATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTT 34676
| ||| | || || | || || || ||| || |||| ||| || || ||
Sbjct 1610 AATTTTAGCCTTGACATTCTCGATGGTATCGGAAGGCTCAACCTCCAAGGTAATTGTCTT 1551
Query 34677 ACCGGTTAACGTTTTCACAAAAATCTGCATGTTG 34710
||| || || || || || |||||||||||| ||
Sbjct 1550 ACCAGTCAAAGTCTTGACGAAAATCTGCATGATG 1517
>seq63354
Length=4016
Score = 107 bits (118), Expect = 1e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
|||||||||||||| || || ||| ||||||||| ||||| || || || | || ||
Sbjct 1991 AGACGCAACACCAAGTGAAGGGTGGACTCCTTTTGGATGTTGTAGTCGGACAAGGTGCGT 1932
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
||||||| | ||| || || || || || ||||| ||||| || || || | ||||||
Sbjct 1931 CCGTCTTCCAATTGCTTTCCAGCGAAGATCAAACGTTGTTGATCTGGTGGGATTCCCTCT 1872
Query 34609 TTGTCTGTGATCTTTTGTTTTAACGATAAAATTGTGTCTTCGCTCTCCACTTCCACGGTT 34668
|||||| |||||| || | | ||| ||||| || ||||||| |||
Sbjct 1871 TTGTCTTGGATCTTGGCCTTGACATTTTCAATGGTGTCGGAAGGTTCGACTTCCAAGGTA 1812
Query 34669 ATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTGATTGT 34715
|| || ||||| || | || || || || |||||||| || ||||
Sbjct 1811 ATGGTCTTACCAGTAAGGGTCTTGACGAAGATCTGCATTCTGGTTGT 1765
>seq26001
Length=10617
Score = 98.7 bits (108), Expect = 6e-16
Identities = 160/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| || | |||||| | ||| ||||| ||||| ||| ||||| || || ||||| |||
Sbjct 8788 CCACCACGAAGACGAAGCACTAAATGAAGAGTAGACTCTTTTTGGATATTGTAATCGGAA 8729
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| || || ||||||||||||| || || || || || || | || || || || ||
Sbjct 8728 AGAGTACGGCCGTCTTCAAGTTGCTTGCCAGCGAAGATCAATCTTTGCTGATCTGGAGGA 8669
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658
| |||||| |||||| ||| || | |||||| | || || || || ||
Sbjct 8668 ATTCCCTCTTTGTCT-TGAATCTTGGCTTTAACATTCTCGATAGTATCCGAAGGTTCTAC 8610
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
||| | ||| || |||||||| || | ||||| || ||||| |||||
Sbjct 8609 TTCTAGGGTAATGGTTTTACCCGTGAGGGTTTTTACGAAAATTTGCAT 8562
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314264018437307
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |