Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaselia_20abdita_20[genbank_20GCA_5F001015175.1_202015-05-29] 121,379 sequences; 412,270,594 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq82395 129 5e-25 >seq82395 Length=2084 Score = 129 bits (142), Expect = 5e-25 Identities = 190/266 (71%), Gaps = 5/266 (2%) Strand=Plus/Plus Query 30015 CGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGA 30074 ||||||| | ||| ||||| ||||| |||||||||||||| |||||||| |||| || Sbjct 978 CGAAATGACGCCATTGGAATCCGTAGACCGGTCCCAGGTCACCCTCTTCTCTGTCGGTGA 1037 Query 30075 AGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCT 30134 | || | |||||||||||| ||||||| || ||| ||||||| || | || ||||| Sbjct 1038 ATCCACACTTGTCCAAAAACTCTCTGGTACTATTGCCGTCCCAAATTCTCACATTCTTCT 1097 Query 30135 C-GGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACG 30193 | | || || |||| || || ||| | | ||||||| ||||||||| |||| Sbjct 1098 CTTGCAAGATC-TTGGCATTGGTCTGACCTTTTATAAACCACAAAAGCTCCTCCGCGACT 1156 Query 30194 GCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGGAAACTG---TCCCTTGAGGCCGTAC 30250 | |||| || || || || || || | | |||||||| ||| ||| | || Sbjct 1157 CCTCTCCAGAAAACTCTTTTCGTGGTCAACAAAGGAAACTGATCTCCACGAAGGTTGAAC 1216 Query 30251 CTCGCCTGAGACCCAAACATGGACAA 30276 ||| |||| ||||||| || ||||| Sbjct 1217 CTCATCTGACACCCAAAAATCGACAA 1242 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405562360112794