Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaselia_20abdita_20[genbank_20GCA_5F001015175.1_202015-05-29] 121,379 sequences; 412,270,594 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq116385 145 7e-30 >seq116385 Length=1425 Score = 145 bits (160), Expect = 7e-30 Identities = 350/530 (66%), Gaps = 0/530 (0%) Strand=Plus/Minus Query 4551 GCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCG 4610 ||||| ||||| || | |||||||| || || ||||| || || || || || || Sbjct 583 GCAAAGTCACAGTGGAGTCCTTCGTCCCTAGAGATAAGTTCATTGGAGAAGGTCAAACCA 524 Query 4611 GGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATG 4670 ||||| ||||| ||||| || | ||| || || ||||| || || ||||| ||| Sbjct 523 GGCATCAAACCCCTCTTCTTCAACCAGAAGATCGCGGCGAAACTTCCGCTGAAGAAAATG 464 Query 4671 CCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTGTCTTTAATC 4730 ||||| ||||| ||||| || | | || | || | | || ||| |||| Sbjct 463 CCTTCAACGGCAGCAAAAGCAATGATTCTCTCGGCAAAGGTGGCGGATTTACTGCCAATC 404 Query 4731 CATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTAAAT 4790 || |||||||||| ||| || ||||| || || || | | | | |||||| || Sbjct 403 CAAGACAATGCCCAGTCAGCCTTCTTCTTCACACAAGGTAGATTCTCGACAGCGTTGAAG 344 Query 4791 AATTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCA 4850 | | |||| ||| || | || |||| ||| |||| | || |||||||| Sbjct 343 AGGAAGTCTCTTTCCTGTGGATCGCGGATGTAAGAGTCGATTAAAATACTGTACATTTCC 284 Query 4851 GAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGA 4910 || || | || || ||||||||||| || || || || || | |||||| || | || Sbjct 283 GAGTGGACGTTCTCCATAGCAATCTGGAACCCATAGAAACAGCGAGCTTCAGTAATCTGG 224 Query 4911 ACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAA 4970 ||||| | || | ||| || |||||||| || || || || || || || || Sbjct 223 ACTTCCTGGGTGAAACGTTCCACCAAGTTTTCATTGACAATGCCATCGGAAGCGGCGAAG 164 Query 4971 AACGCCAAAACATGAGATATAAAGTACTGTTCGTCAGGCTTAAGTTTTTTCCAGTGGGGC 5030 || |||||||| || || || |||| || || | | || | || | ||||| || Sbjct 163 AAAGCCAAAACGTGGGAAATGAAGTGCTTCTCTCCGGAATTCAACTTCTCCCAGTCGGCT 104 Query 5031 AAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGC 5080 || || | || ||| || || || |||||||| ||||| || ||||| Sbjct 103 TGGTCCTTGGATAGATCGACCTCCTCCACAGTCCAGAACGAAGCCTCCGC 54 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 426417862724207