Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaselia_20abdita_20[genbank_20GCA_5F001015175.1_202015-05-29] 121,379 sequences; 412,270,594 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq82395 192 4e-44 >seq82395 Length=2084 Score = 192 bits (212), Expect = 4e-44 Identities = 492/741 (66%), Gaps = 10/741 (1%) Strand=Plus/Plus Query 26993 ATCAGACTGCCATCCTCATCCTTATGGCGGGATGAGGGTCGTAACCCTCCAGGGAGAAAT 27052 |||| || ||||| ||| | |||| || | || || || || || | | ||||| Sbjct 462 ATCAAACAGCCATTTCCATTTTAATGGTTGGGTATGGATCATATCCTTCGATAGTGAAAT 521 Query 27053 CCTCTGCCTTAAAGTCGTCCAGGCTCTCCACCCTCCTGTTTATCCTCAGTGTGGGAAAGG 27112 | || || ||||| || | | || || | | |||||| |||| | || || | Sbjct 522 CTTCGAATTTGAAGTCCTCGATTTTTTCAACTTTACGGTTTATGACCAGTTTAGGGAATG 581 Query 27113 GTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGTAGACGTGAG 27172 |||| || | |||| ||||| |||| |||||||| |||| | ||| ||||||| Sbjct 582 GTCTTGGAACTCTCTTCAGCTGTTCTTTCAAAGGTTCCACATGATTCTTGTAAACGTGAG 641 Query 27173 CGTCTCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGT 27232 |||||| | | ||| ||||| || ||| | ||| ||| || || || ||||||| Sbjct 642 TGTCTCCGAAAGAGTGAACAAAGTCGCCCACCTTTAGTCCGCAAACATGGGCAATCATGT 701 Query 27233 ACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACC 27292 | || | | | || ||||| || || || || || || ||||| | || | || | Sbjct 702 AGGTCAACAATGCATAACTGGCAATATTGAACGGAACTCCAAGCCCAACATCGGCAGATC 761 Query 27293 TCTGGTAGAGCTGACACGAGAGCTCTCCATCGCTT--ACGTAAAACTGACATATGGCGTG 27350 ||||||| | | ||| ||||| || | | ||| ||||| |||||| | || Sbjct 762 TCTGGTACATCAAACATGAGAGTTCGTC--CCCTTGAACGTAGAACTGAGCGAAACAATG 819 Query 27351 GCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGATGATGCG 27410 || ||||| | |||||| | | ||| ||| |||||||| ||| || || Sbjct 820 ACAAGGAGGCAAAGCCATTTTGGGGAGGTCCACGGGATTCCAGGCAGACATACAAATCCG 879 Query 27411 CCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTTTTGCAGCTGATCCACCCCCAT 27470 ||||| ||||| ||| |||| | | | ||| | ||| || || || || | Sbjct 880 TCTGTCCGTAGGGTTATTCTTGATTCTCTGAATGACGTCATTCAGTTGGTCTACGCCTTT 939 Query 27471 CCCCGAGTAGTCTACCCT--CATGTCCGTGTACTCTGCTCCGAAATGCCTCCATTGGAAC 27528 | ||||| | | | || || | ||||||||||||||||| | ||||||||| Sbjct 940 GTTGGTATAGTC-ATCGTGACAGGTTT-TATACTCTGCTCCGAAATGACGCCATTGGAAT 997 Query 27529 CCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAG 27588 ||||| |||||||||||||| |||||||| |||| ||| || | |||||||||||| Sbjct 998 CCGTAGACCGGTCCCAGGTCACCCTCTTCTCTGTCGGTGAATCCACACTTGTCCAAAAAC 1057 Query 27589 TCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTC-GGAGAGCTCTTTGGAGTT 27647 ||||||| || ||| ||||||| || | || |||||| | || || |||| || Sbjct 1058 TCTCTGGTACTATTGCCGTCCCAAATTCTCACATTCTTCTCTTGCAAGATC-TTGGCATT 1116 Query 27648 TGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAAAAGACCCTCTT 27707 || ||| | | ||||||| ||||||||| |||| | |||| || || || || Sbjct 1117 GGTCTGACCTTTTATAAACCACAAAAGCTCCTCCGCGACTCCTCTCCAGAAAACTCTTTT 1176 Query 27708 GGTCGTGAGGAGGGGAAACTG 27728 || || | | |||||||| Sbjct 1177 CGTGGTCAACAAAGGAAACTG 1197 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 368960585574149